Betaproteobacteria bacterium GR16-43: BWI17_19875
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Entry
BWI17_19875 CDS
T04726
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
beba
Betaproteobacteria bacterium GR16-43
Pathway
beba03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
beba00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BWI17_19875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
beba03019
]
BWI17_19875
03009 Ribosome biogenesis [BR:
beba03009
]
BWI17_19875
Messenger RNA biogenesis [BR:
beba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BWI17_19875
Ribosome biogenesis [BR:
beba03009
]
Eukaryotic type
Pre-60S particles
RNases
BWI17_19875
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
AtzG-like
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
APV51742
LinkDB
All DBs
Position
complement(4282777..4283349)
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AA seq
190 aa
AA seq
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MAQDKTPLVWIDMEMSGLVPERDRILEVAMLVTDAELNTIAAAPVLVVHQPDEVLDAMDS
WNRATHGKSGLVDRVRASTLGEAEAEKILVDFLKPLVASRAAPLCGNTVHQDRRFMVRYM
PVLDEYLHYRIIDVSTLKELAKRWRPDVVAGFSKEGKHEALADIVESIEELKHYRRTFLR
AGGPEDPALP
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagataaaacgccgctggtctggatagacatggagatgtcgggcctcgttccc
gaacgcgaccgcatcctcgaggtggcgatgctggtgaccgacgcggagttgaacacgatc
gccgcggcgccggtcctggtcgtgcaccagcccgacgaggtcctcgacgcgatggactcg
tggaaccgggccacgcacggcaagtcggggttggtcgatcgcgtgcgcgcctcgacgctg
ggcgaggccgaggccgagaagatcctggtcgatttcctgaagcccctggtcgcttcccgg
gccgcgccgctctgcggcaacacggtgcaccaggaccggcgcttcatggtgcgctacatg
ccggtcctcgacgaatacctccactaccgcatcatcgacgtctcgacgttgaaggaactc
gccaagcgctggcggcccgatgtcgtggcgggtttctcgaaggaaggcaagcacgaggcg
ctcgcggacatcgtcgagtcgatcgaggagctgaagcactaccgccgcacgttcctgcgg
gcgggcggccccgaggacccggcgctgccctag
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