Betaproteobacteria bacterium GR16-43: BWI17_20000
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Entry
BWI17_20000 CDS
T04726
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
beba
Betaproteobacteria bacterium GR16-43
Pathway
beba03030
DNA replication
beba03430
Mismatch repair
beba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
beba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BWI17_20000
03430 Mismatch repair
BWI17_20000
03440 Homologous recombination
BWI17_20000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
beba03032
]
BWI17_20000
03400 DNA repair and recombination proteins [BR:
beba03400
]
BWI17_20000
Enzymes [BR:
beba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BWI17_20000
DNA replication proteins [BR:
beba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BWI17_20000
DNA repair and recombination proteins [BR:
beba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BWI17_20000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
RMI2
Motif
Other DBs
NCBI-ProteinID:
APV51765
UniProt:
A0A1P8FNX9
LinkDB
All DBs
Position
complement(4306454..4309873)
Genome browser
AA seq
1139 aa
AA seq
DB search
MAAPRFVHLRLHSEYSIIDGMARVDDAVDAAAADGMPALAITDLANLFGAIKFFQAARGV
GVQPIVGCDLWLSNERSRDHPYRLAVLCRNREGYLALCALLTRAHVENHWRGRAEVKREW
LRGLPGLVVLSGARLGDVGQALGAGNLVQAEALARAWEADFPGAFYLELQRADPDRDEPY
VRAAVALAGRLDLPVVATHPIQFVKREDYRAHEARVCIAQGYVLGDQRRPREFRPSQYFK
TQDEMAEIFSDLPEALANSVEIARRCTFEFELGKSRLPDFPTPNGETIEDYLRKTSHDGL
ELRLAELYPEPAARDEARPRYAERLEFELKTIIQMGFAGYFLIVADFINWAQNHGVPVGP
GRGSGAGSLVAYVQGITGLDPLRYELLFERFLNPERVSMPDFDIDFCQDGRDRVIDYVKQ
KYGAECVSQIATFGTMAAKAVVRDVGRVLGMPYGEVDRIAKLVPFELGITLTRALEVEPQ
LKALAKEQEGVGELMELALALEGLSRNVGMHAGGVLIAPGKLTDFTPLYSAEGSTALVSQ
FDKDDVEKAGLVKFDFLGLTTLTIIAEAERNIRALGHADFDIEKIPLDDPAAYKVFSSGN
TVSIFQFESRGMRDLIMKARPDRLEDLIALNALYRPGPMDLIPEFIDRKHGRQRWEYLDP
RLKEILEPTYGVMTYQEHVMTIAQVIGGYTLGGADLLRRAMGKKKPEEMAKQRAIFMKGA
TGGGLAEAKANILFDQMEKFAGYGFNKSHSAAYALVAYQTAYLKSHHAAAFMAANLSAVM
DDTDKVQSFYDDAVKNGLKIAAPDVNTGGHRFAALDEKNIRFGLGAVKGTGAGAIENIVA
ARASGGAFRDLADFCRRVDRRVVNRRAMEALIRAGAFDAVEPNRASLAASLGAAIEVAEK
GEQYANQTSLFGGGDEASPEAFTLVPMPPWGERERLLNEKQSLGFYLSGHPFNAYRAELR
RVAATPLAKVAPTNYGETVMLAGVIYGVQMRNTRRGRMAILTLDDGTAKVEVVVFGELFN
EKRSVIQEDAVVALAGKVQNDEFSGGLRVTAEKLMDLAEVRSAHAKVLRLSINGQADAAK
LKQVLAPYAGGACAIAIRYRNAQGECDIRLPDAYRVKVSEPLLASLSEWLREENVEVVY
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccccgcttcgtccacctccggctgcactccgaatactcgatcatcgacggg
atggcgcgcgtcgacgacgcggtcgatgccgccgcggccgacggcatgccggcgctcgcc
atcaccgacctggcgaacctgttcggcgccatcaagttcttccaggcggcgcgcggcgtg
ggcgtgcaaccgatcgtgggttgcgacctctggctctccaacgagcgcagccgcgaccac
ccctaccgcctcgcggtgctgtgccgcaaccgcgagggctacctcgcgctttgcgcgttg
ctcacgcgcgcgcacgtcgagaatcactggcgcggccgcgccgaagtgaagcgcgagtgg
ctgcgcggcttgccgggcctggtcgtgctctcgggcgcccggctgggggacgtggggcag
gcgctcggcgccggaaacctcgtgcaggccgaagccctggcgcgggcctgggaggcggat
ttccccggcgcgttctacctcgagctccagcgagccgaccccgatcgcgacgaaccttac
gtccgcgcggccgtggccctcgccgggcgcctcgatctcccggtggtggcgacgcacccg
atccagttcgtgaagcgcgaggactaccgggcccacgaagcgcgcgtctgcatcgcgcaa
ggctacgtgctgggcgaccagcgccgcccgcgggaattccgtccgtcgcagtacttcaag
acgcaggacgagatggcggagatcttctccgacctgcccgaagcgctcgccaactcggtc
gagatcgcgcggcgctgcaccttcgaattcgagctgggcaagagccggctcccggatttc
cccacgccgaacggcgagacgatcgaggactacctgcgcaagacgtcccacgacggcctc
gagttgcgcctggccgagctctatccggagccagcggcgcgcgacgaagcgcggccgcga
tatgccgagcggctggagttcgagctgaagaccatcatccagatgggattcgccggctac
ttcctgatcgtcgcggacttcatcaactgggcgcagaaccacggggtgccggtgggtccg
ggccgtggctcgggcgccggctcgctggtcgcctacgtgcagggcatcacgggcctcgat
ccgctgcgctacgagctgctcttcgagcgcttcctgaatcccgagcgcgtgtcgatgccc
gacttcgacatcgacttctgccaggacgggcgcgaccgcgtcatcgactacgtgaagcag
aagtacggcgcggaatgcgtctcgcagatcgccacgttcggcacgatggcggccaaggcg
gtcgtgcgggacgtgggccgcgtgctcggcatgccctacggcgaggtggaccgcatcgcg
aagctcgtgcccttcgagctcggcatcacgctcacccgggccctcgaagtcgagccgcag
ctgaaggcgctggcgaaggagcaggagggcgtgggcgaattgatggagctcgccctcgcg
ctggaaggcctgtcgcgcaacgtcggcatgcatgcgggcggcgtgctgatcgccccgggc
aagctgaccgacttcacgccgctctacagcgcggaaggctccacggcgctggtgagccag
ttcgacaaggacgacgtcgagaaggcgggcctggtgaagttcgacttcctcggcctcacg
acgctcacgatcatcgccgaggccgaacgcaacatccgcgcgctcgggcatgcggacttc
gacatcgagaagatcccgctcgacgatccggccgcctacaaggtcttctcctcgggcaac
acggtctcaatcttccagttcgaatcgcgcggcatgcgcgacctcatcatgaaggcgcgg
cccgaccgcctcgaggacctgatcgcgttgaacgcgctctaccgcccgggcccgatggac
ctcatccccgagttcatcgaccgcaagcacggccgccagcgctgggagtacctcgacccg
cgcctgaaggaaatcctcgagccgacctacggcgtcatgacgtaccaggagcacgtgatg
acgatcgcgcaggtgatcggcggctacacgctgggcggcgcggacctgctgcgccgcgcg
atgggcaagaagaagcccgaggagatggccaagcagcgcgcgatcttcatgaagggcgcc
accgggggcgggctcgcggaggcgaaggcgaacatcctgttcgaccagatggagaagttc
gcgggctacggcttcaacaagtcgcactcggcggcctacgcgctggtcgcctaccagacc
gcctacctcaagtcgcaccacgccgcggccttcatggcggccaacttgtcggcggtgatg
gacgacaccgacaaggtccagtccttctacgacgacgcggtgaagaacgggctgaagatc
gcggcccccgacgtgaacacgggcggccaccggttcgcggcgctcgacgagaagaacatc
cgcttcgggttgggcgcggtgaagggcacgggcgcgggcgcgatcgagaacatcgtcgcg
gcgcgcgcttccggcggggccttcagggacctcgccgacttctgccgccgcgtcgaccgc
cgggtcgtgaaccgccgcgcgatggaggcgctcatcagggccggtgcgttcgacgccgtc
gagcccaaccgtgcgagcctcgccgcatcgctcggcgcggcgatcgaggtcgcggagaag
ggcgagcagtacgccaaccagacgagtctcttcggcggcggggacgaggccagccccgaa
gccttcacgctggtcccgatgccgccgtggggcgagcgcgaacgcctgctgaacgagaag
cagagcctcggcttctacctctccggccacccgttcaatgcctatcgcgccgaactgcgc
cgcgtggccgccacgccgctcgcgaaggtcgcgcccaccaactacggcgagaccgtgatg
ctggccggcgtgatctacggcgtgcagatgcgcaacacgcggcgcgggcgcatggccatc
ctcacgctggacgacggcaccgccaaggtcgaagtcgtcgtcttcggcgagctcttcaac
gagaagcgatccgtgatccaggaagacgccgtcgtggcgcttgcaggcaaggtccagaac
gacgagttctcgggcgggctccgcgtgaccgccgagaagctgatggatctcgccgaggtg
cgctcggcgcatgcgaaagtgctgcgcctgtcgatcaacggccaggccgacgcggcgaag
ctgaagcaggtgctggcgccctacgcgggcggtgcctgcgcgatcgcgatccgctaccgc
aatgcgcagggcgaatgcgacatccgcctgccggatgcctaccgcgtcaaggtctcggag
ccgctgctcgcctcgctgagcgagtggctgcgcgaggaaaacgtcgaggtcgtctactag
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