KEGG   Betaproteobacteria bacterium GR16-43: BWI17_20115
Entry
BWI17_20115       CDS       T04726                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
beba  Betaproteobacteria bacterium GR16-43
Brite
KEGG Orthology (KO) [BR:beba00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:beba03016]
    BWI17_20115
Enzymes [BR:beba01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     BWI17_20115
Transfer RNA biogenesis [BR:beba03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BWI17_20115
 Prokaryotic type
    BWI17_20115
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 TruB_C
Other DBs
NCBI-ProteinID: APV52558
UniProt: A0A1P8FR34
LinkDB
Position
complement(4329285..4330154)
AA seq 289 aa
MGGVLLLDKPEGWTSTQALGRAKRLLGLRKGGHTGTLDPFATGLLPLVFGEATKFSRFLI
DAPKEYLATLCLGQTSTTGDTEGAISDAVPVLATSEQIDDVLRGFVGVQFQVPPMHSALH
HQGKRLYELAREGVEVERTPREIFIHSIERADKSGENLIISVKCSKGTYIRTLAQDIGAR
LGCGAYLTGLRRTAVAGFRLEQAITVEGLAEAGARSRECLLSPEVLVRDLPARHLDEPEA
DAIEHGRAITLPEPVCGDVALFGPGGRFLGVGLGTADGAMSPARLLANG
NT seq 870 nt   +upstreamnt  +downstreamnt
ctgggcggtgtcctgctgctcgacaagcccgagggctggacgtccacgcaggcgctcggg
cgggccaagcgcctcctggggctgcgaaaaggcggtcacaccggcaccctcgaccccttc
gcgaccggcttgctgcccctggtcttcggcgaggcgacgaaattctcccggttcctgatc
gatgcccccaaggagtacctggccaccctgtgcctcgggcagacctcgaccacgggcgat
accgaaggggcaatatccgatgcggtacccgttctcgctacttccgagcagatcgacgac
gtactcaggggtttcgtgggagttcaattccaagtgccgcccatgcactcggccttgcat
caccagggcaagaggctctacgagctggcccgggaaggggtcgaggtggagcggaccccc
cgcgagatcttcatccactccattgaacgtgctgataaaagcggcgaaaatctcataatt
tcggttaagtgctcaaaaggaacgtacatccgcaccctggcccaggacatcggtgcccgg
ctcggatgcggcgcctaccttacgggactgaggcgcacggctgtcgcgggtttccggctg
gagcaagccatcacggtcgaaggccttgcggaggcgggcgctcgctcacgggagtgcctg
ctttctccggaggtcctggtccgcgacctgccggcaaggcatctggacgagccagaagca
gatgcgatcgagcacggccgggccatcacgttgcccgaacccgtctgtggggacgtggcg
ctcttcggaccggggggccggttcctcggcgtggggctcgggacggccgacggggcgatg
tctcccgcccgcctcctggccaacgggtaa

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