Blochmannia endosymbiont of Colobopsis nipponica: GN160_00340
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Entry
GN160_00340 CDS
T07558
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
bec
Blochmannia endosymbiont of Colobopsis nipponica
Pathway
bec03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
bec00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
GN160_00340 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bec03011
]
GN160_00340 (rpsA)
Ribosome [BR:
bec03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
GN160_00340 (rpsA)
Bacteria
GN160_00340 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
DUF5035
Motif
Other DBs
NCBI-ProteinID:
QOI11068
LinkDB
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Position
74880..76556
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AA seq
558 aa
AA seq
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MTESFAKLFEESLKKIKICPGSIISATVIDITKNVVLVDAGLKSESTIPIDQFQNSQGIL
EVKVGDKVDVALDAIEDGFGETLLSREKAKRYEAWTVLEKAYKEETTVVGIINGRVKGGF
TVELNGVRAFLPGSLVDIRPIHDSFHLEGRECEFKVIKLDQKRNNIVVSRRAVIESESNA
ERDYLLNKLQENMEIKGIVKNLTDYGAFIDLGGVDGLLHITDMAWRRVKNPNEIVNLGDE
VNVKVLKFDRERNRVSLGLKQLGEDPWITITKRYQEGTKLIGRVTNLTDYGCFIEVEGGI
EGLVHISEMDWTNKNVHPSKMVTIGEFIEVMVLDIDKERRRISLGLKQCKLNPWKKFAET
HNKGDRVVGKIKSITDFGIFIGLDGGIDGLVHTSDISWNNLDEEDICKYKKGDEITAMVL
QVDADRERISLGLKQLLDDPLNIYLSLNKKGSIVAGLIKSVDLKGAVVKLKDGIEGYLRR
PEISSNNQDITNIFHVGASVNAKVIGVDRKNRLVNLSIDFCDESINLNPVNANLNQQEEI
IHFSNTMIEAFKAATKNE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatcatttgctaaactttttgaagaatctttaaagaaaattaagatttgtcct
ggttctattattagtgctactgtgattgatattaccaaaaatgttgttttggtagatgct
ggtttaaaatctgagtctactatacctattgaccagtttcaaaattcccagggaatttta
gaagtaaaggtaggagataaggttgatgttgcgttagatgctatagaggatggttttggc
gaaacgttattgtctcgtgaaaaagcaaagcgctatgaagcatggactgtattagaaaaa
gcttataaagaagaaactactgtggtaggtataattaatggtagagtaaagggtggtttt
actgttgaattgaatggagtacgcgcttttttgcctggttctttggttgatattcggcct
atacatgattcttttcatttagaaggtagagaatgtgaatttaaagtaattaaattagat
cagaaacgtaataatattgtagtttctcgccgcgctgttattgaatctgaaagtaatgct
gaacgagactatcttttaaacaaattacaagaaaatatggaaattaaaggtattgtaaaa
aatttaactgattatggagctttcatagatcttggaggtgtagatggtttgttacatata
actgatatggcgtggcgaagagttaaaaatcctaatgaaatagttaatctcggtgatgaa
gttaacgttaaagtattaaaatttgatagggaacgtaatcgtgtttctttaggtttaaaa
caattaggtgaagatccatggatcactattacgaagcgttatcaagagggtactaaatta
ataggacgagttaccaatttaactgattatggttgtttcatagaagttgaaggaggaatt
gaggggttagtgcatatttccgaaatggattggactaataaaaatgtgcatccatctaag
atggttactattggtgaatttattgaggttatggtattggatattgacaaggaacgtcgt
cgtatctctttgggtttaaaacagtgcaagttaaatccgtggaaaaaatttgctgaaact
cataataagggagatcgtgttgtaggtaaaataaagtcaattactgattttggtattttt
attggtcttgacggaggcattgatggtctagtacatacgtctgatatttcttggaataac
ttagatgaagaggatatatgtaaatataagaaaggggatgaaataactgcgatggttctt
caagtagatgcagaccgtgaacgtatttctttaggtttaaagcaattattagatgatcca
ttaaatatttatttatctttaaataaaaagggttccattgttgctggattaatcaagtct
gttgatttgaaaggggctgttgttaagttaaaagatggtattgaaggttatttacgacga
cctgaaatatcttcaaacaatcaagatattactaatatttttcatgttggtgcctcagtg
aatgcgaaagttattggtgttgatcgtaagaatcgtttagttaatttatctatagatttt
tgtgatgaaagtattaatcttaatcctgttaatgctaatctcaatcaacaagaagaaatt
attcatttttctaatactatgatagaagcatttaaagcggcaactaaaaatgaataa
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