Blochmannia endosymbiont of Colobopsis nipponica: GN160_00345
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Entry
GN160_00345 CDS
T07558
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
bec
Blochmannia endosymbiont of Colobopsis nipponica
Pathway
bec02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bec00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GN160_00345 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bec02000
]
GN160_00345 (msbA)
Enzymes [BR:
bec01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
GN160_00345 (msbA)
Transporters [BR:
bec02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GN160_00345 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
RsgA_GTPase
AAA_21
DUF5906
AAA_29
AAA_22
AAA_15
AAA
AAA_16
nSTAND3
AAA_23
MMR_HSR1
DUF87
DUF815
ABC_membrane_2
CbiA
AAA_18
AAA_5
NACHT
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QOI11069
LinkDB
All DBs
Position
76792..78543
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AA seq
583 aa
AA seq
DB search
MLKNNSYFSTWKIFSRLWPIISPFRIGLLVATITLILNAGSDTLMLSLLKPLLDDGFGKA
NKNVFVWMPLAIISLMSIRGISGFISNYCISWVSGKVVMEIRRRLFSHIMGMPVSFFCKQ
SIGALLSRITYDSEQVASSSSSALIVIIREGASIIGLAVMMFYHSWQLSLIIFIIAPIVS
LVIKLVSNKFRRISKKIQTTMGLLTSSAEQMLKGHKEVLIFGGQKIEKKHFNYVSNCMRQ
QNMKMVAISSIFDPIIQFIAALALVFVLYVASIPKIMDILTAGSITVIFSSMIVLMKPLK
SLTNVNAQFQKGMAACQTLFSILDLKNEEDSGFLNVARVHGNISFKNVTFFYPDKNTPSL
CNIDFNISSGHTVALVGKSGSGKSTIVNLLARFYNICQGEILLDDVNINKYKLSSLRNQI
AFVSQDVHLFNDTIANNIAYAYKDCYAIRKSIEEVAYMAGVMDFVSQMEYGLDTIIGENG
VLLSGGQRQRIAIARALLRNCPILILDEATSALDSESEKAIKKVFDRLRNNKTLLIIAHR
FSTIETADKILVIENGYIVERGTHASLIRHQGIYAQLHKLQFN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaataattcttatttttctacttggaaaatttttagtcgtctttggccaatt
atatctccttttagaataggtctattagttgccacaattaccctaatattaaatgctggt
agtgatactttaatgttgtcactacttaagcctttgcttgacgatggttttggtaaggct
aataaaaatgtttttgtttggatgccattagcaataattagtcttatgagtatacgtggt
attagtggttttatttctaattattgtatatcgtgggtttctggtaaagtggttatggaa
attcgtcgtcgattattcagtcatataatgggtatgccagtatcatttttttgtaaacag
tctatcggagcattgttatctcgtataacttatgattcagaacaagtagcttcttcttct
tccagtgcattgattgttattattcgcgaaggggcttccattattggattagctgtaatg
atgttttatcatagttggcagttgtcgttaataatatttataatagcgccaattgtttcc
ttagttataaaattggtttctaacaaatttagaagaattagtaaaaaaatacaaactaca
atggggttgttaactagtagcgctgaacaaatgttaaagggtcataaagaagtattgatt
tttggtggacaaaaaatagagaagaaacattttaattatgttagtaattgtatgagacaa
caaaatatgaagatggttgctatttcttcaatttttgatcccattattcaatttatagct
gctttagctttggtttttgtattatatgtagctagtattccaaagattatggatatctta
actgctgggagcattactgtaattttttcatcgatgatagttctaatgaaaccattaaaa
tctttaacaaatgttaacgctcagtttcaaaaaggtatggctgcttgtcaaactttgttt
tcaattctcgatttaaaaaatgaagaagatagcggttttttaaatgttgctcgtgtacac
ggaaatattagttttaaaaatgtcacttttttttatcctgataaaaatactccttctttg
tgtaatattgattttaatatttccagtggacatactgtagcattagtaggtaaatcgggg
tctggaaaatcaactattgtcaatttattagctcgtttttataacatatgtcaaggagaa
atattacttgatgatgtcaatataaataaatataaattatcgtcattacgtaatcagata
gcatttgtttctcaggatgttcatttattcaatgatactattgctaataatattgcttat
gcttataaagattgttatgccattcgtaaatctatagaagaagttgcatacatggctgga
gtaatggattttgttagtcaaatggaatacggattagatacaataataggtgaaaatggt
gtgcttttatctggaggacaacgtcaacgaattgcaattgcacgtgcattgttacgcaat
tgtcccattttaattcttgatgaagctacttctgcattagattctgaatcggaaaaggcc
atcaaaaaagtttttgatagattaagaaataataaaacattattaataattgctcataga
ttttctacaattgaaacagctgataaaattttggtaatagaaaatggctacattgttgaa
cgcgggactcatgcatctttaatacgtcatcaaggaatatacgctcagttacacaaatta
caatttaattga
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