Blochmannia endosymbiont of Colobopsis nipponica: GN160_00670
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Entry
GN160_00670 CDS
T07558
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bec
Blochmannia endosymbiont of Colobopsis nipponica
Pathway
bec03030
DNA replication
bec03430
Mismatch repair
bec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GN160_00670 (holA)
03430 Mismatch repair
GN160_00670 (holA)
03440 Homologous recombination
GN160_00670 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bec03032
]
GN160_00670 (holA)
03400 DNA repair and recombination proteins [BR:
bec03400
]
GN160_00670 (holA)
Enzymes [BR:
bec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GN160_00670 (holA)
DNA replication proteins [BR:
bec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GN160_00670 (holA)
DNA repair and recombination proteins [BR:
bec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GN160_00670 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QOI11128
LinkDB
All DBs
Position
147638..148648
Genome browser
AA seq
336 aa
AA seq
DB search
MIYLYPEELDTKLINKINIPYILYGNDLYLLQETKKKIFKTAKNYNFRENYNFILNEHTD
WDHIINICKTLNLFSCRKILFFTLTHNYYNKIIDKNLSYLISFINNDLLFIIHINQLNEN
IKKYMWFKIIHKKSILINCNAPKNNHLLNWILNKTKKMDLSLEQAGYHLLCKYYKNNLFD
LMKILENLCFIYDKKKVSLIKIQNIINENINFTPSHWISSVLSGKYQLACYILQKLKLED
ADPIILLRKIQQEVIFLIRLKRQNKREVTPNILLNEYKIYKTKRQFLLTKAFKRLNQYQL
NASINIMIQLELRLKKNEICYDTWNKLEILTTLLCM
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatttatttatatccagaagaattagatacgaagctaataaataaaattaatatacca
tatatcctatatggtaatgacctttatttattacaggaaaccaaaaagaaaatttttaaa
acagcaaaaaattataattttagagaaaattataattttattttaaatgaacatactgat
tgggatcatataattaatatatgtaaaactttaaatttattttcttgtcggaaaatattg
tttttcactttgacacataattattacaacaaaattattgacaaaaatttatcttattta
atctcattcattaataatgatttactgtttattattcatattaatcaattaaatgaaaat
ataaaaaaatacatgtggtttaaaataattcataaaaaatcaattttaattaattgtaat
gcacctaaaaacaatcatttactaaattggatattgaacaaaacaaaaaaaatggatctt
tcattagaacaagctggctatcatttactctgtaaatactacaaaaataatctatttgat
ttaatgaaaatattagaaaatttatgcttcatatatgataaaaaaaaagtttcgttaatt
aaaatacagaatataatcaatgaaaatataaattttaccccgtcacattggattagcagt
gttttatctggtaaataccaattagcctgctatattctacaaaaattaaaattagaagac
gcggatcctataattctgttgcgcaaaattcaacaagaagtcatcttcttaataagatta
aaacgacaaaacaaacgagaagtgacacctaatattttattaaatgaatataaaatatac
aaaactaaacgccaatttttattaacaaaagcgtttaaacgacttaatcaataccaatta
aatgcatctataaacatcatgattcaattagaattaagattaaaaaaaaacgaaatttgt
tacgatacttggaacaaactggaaattttaactacattattatgtatgtaa
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