Blochmannia endosymbiont of Colobopsis nipponica: GN160_01065
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Entry
GN160_01065 CDS
T07558
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bec
Blochmannia endosymbiont of Colobopsis nipponica
Pathway
bec03030
DNA replication
bec03430
Mismatch repair
bec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GN160_01065 (dnaQ)
03430 Mismatch repair
GN160_01065 (dnaQ)
03440 Homologous recombination
GN160_01065 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bec03032
]
GN160_01065 (dnaQ)
03400 DNA repair and recombination proteins [BR:
bec03400
]
GN160_01065 (dnaQ)
Enzymes [BR:
bec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GN160_01065 (dnaQ)
DNA replication proteins [BR:
bec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GN160_01065 (dnaQ)
DNA repair and recombination proteins [BR:
bec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GN160_01065 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QOI11314
LinkDB
All DBs
Position
complement(240115..240879)
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AA seq
254 aa
AA seq
DB search
MSVVLNYLRQIVLDTETTGLNKSGVHYEGHRIVEIGAVELINRRLTGKNFHVYLNPGRLV
DPEAFKIHGISDIFLSKKPIFSDIVNEFINFVRGSELIIHNAQFDIGFLNYELSMIDNFL
VNIESLCSVIDTLFLARKKFPGRRNSLDALCERYSIDRSRRALHNAMIDAKILASIFLLM
TGGQTTMQFIKKDRYTLSNVKVIGNYEIASNKNCDLKVIYANREEIIQHKNILDLIQKQS
AYCMWYSKCKDSNT
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
attagtgttgttttgaactatttacgacaaattgtgcttgatactgaaactacaggtctt
aataaatctggtgttcattatgaaggtcaccgtattgttgaaattggcgcagttgaatta
attaatcgtcgtttaacagggaaaaattttcatgtttatcttaatcctggtcgtttggtt
gatccagaagcttttaagattcacggaattagtgatattttcctttctaaaaaaccaatt
ttttcagatattgtgaatgaatttataaattttgtccgcggaagtgaattaattattcat
aacgctcaatttgatataggttttttaaattacgaattaagtatgattgataatttttta
gtaaatattgagtctttatgttcagtaattgatactttgtttttggctagaaaaaaattt
cctggcagacgtaatagtttagatgcattatgtgaacgttattcaatagatagaagtcgt
cgtgctttacataatgctatgattgatgcaaagattttggcttctatttttcttttgatg
accggcggtcagactacgatgcaatttataaaaaaagatagatatacattgtcaaatgta
aaggtaataggaaattatgaaatagcgtctaataaaaattgtgatttaaaggttatttat
gctaatagagaagaaataatacaacataaaaatatattagatttaatccaaaaacaaagt
gcatattgtatgtggtattccaaatgtaaagattcgaatacataa
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