Blochmannia endosymbiont of Colobopsis nipponica: GN160_01115
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Entry
GN160_01115 CDS
T07558
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bec
Blochmannia endosymbiont of Colobopsis nipponica
Pathway
bec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GN160_01115 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bec03021
]
GN160_01115 (rpoA)
03400 DNA repair and recombination proteins [BR:
bec03400
]
GN160_01115 (rpoA)
Enzymes [BR:
bec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GN160_01115 (rpoA)
Transcription machinery [BR:
bec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GN160_01115 (rpoA)
DNA repair and recombination proteins [BR:
bec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GN160_01115 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QOI11315
LinkDB
All DBs
Position
complement(247593..248597)
Genome browser
AA seq
334 aa
AA seq
DB search
MHNLVTEFLKPRLVNIEQISATHTKVTLEPLERGFGHTLGNALRRILLSSMPGYAVTEVK
IDGILHEYSTKEGVQEDILEILLNLKGLALKVQGKDSILLTLYKSGIGPVIAADITHDEN
VEIVKPQHILCHLTDKNAEINMQIKVERGRGYVPAATRIYTEGNNNISSSSIGRLLIDAC
YSPVERIAYNVEAARVEQRTDLDKLIIDMETNGTIDPEEAIRRAATILSEQLEAFVDLRD
VRQPELKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLG
KKSLTEIKDVLASRGLTLGMHFDNWPPSSLIDER
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcataatttggtaacggaatttttaaagccacgtttggtgaatattgaacaaattagt
gcaacacataccaaagttacgcttgaacctttggaacgtggttttggtcatacattaggt
aacgcactacgtcgtattttactttcgtcaatgcctggatatgcagttacagaagtaaaa
attgatggtattctgcatgagtatagcaccaaagagggtgtgcaagaagatatattggaa
attttacttaatttaaaaggattagctttgaaagttcaaggtaaagatagtattctttta
actttgtataagtctggtattggcccagtaatagctgctgatattactcatgatgaaaat
gttgagatagtaaaaccacaacatatattgtgtcatttaactgataaaaatgcagaaatt
aatatgcaaattaaagttgagcgtggtcgtggttatgttcctgctgcaactagaatatat
acggaagggaataataatatctcctcttcttctattggtcgtttattaatagatgcatgt
tatagtccagtagaacgcatagcatataatgtagaagcagcacgtgttgagcagcgtact
gatttagataaattaattatagatatggaaactaacggaactattgatcctgaagaagct
attcggcgggcagcaaccattttatctgaacaattggaagcttttgttgatttacgtgat
gtaagacaaccagaattaaaagaagaaaaaccagaatttgatcctatattattacgtcct
gtagatgatctagagttaactgtacgttctgctaattgtcttaaggcggaggcaattcat
tatattggcgatttagttcaacgtacagaggttgaattgttaaaaacacctaatttaggt
aaaaaatcactcactgaaattaaagatgtattagcttctcgtggattaactttaggcatg
catttcgataattggcctccttctagtcttattgatgaaaggtaa
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