KEGG   Blochmannia endosymbiont of Colobopsis nipponica: GN160_01665
Entry
GN160_01665       CDS       T07558                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
bec  Blochmannia endosymbiont of Colobopsis nipponica
Pathway
bec03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GN160_01665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bec03019]
    GN160_01665
   03009 Ribosome biogenesis [BR:bec03009]
    GN160_01665
Enzymes [BR:bec01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     GN160_01665
Messenger RNA biogenesis [BR:bec03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GN160_01665
Ribosome biogenesis [BR:bec03009]
 Prokaryotic type
  rRNA helicases
   GN160_01665
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII TrkA_N
Other DBs
NCBI-ProteinID: QOI11297
LinkDB
Position
complement(363172..364875)
AA seq 567 aa
MLIKNSSFINLGLNSFIINALKDLGYKEPSPIQAKCIPHLLAGLDVLGMAQTGSGKTAAF
VLPLLQNVDSKLMATQVLVLTPTRELAIQISTVCSSLAKYLPDIYIVPIYGGQRYDIQFR
ALNKGAHIIVGTPGRLLDHLGRGTLDLTKLHSLVLDEADEMLRMGFIDDVESILLKIPVK
HQTALFSATLPSAIRRIVHRFMKNPKEIFIHSGTSACSDIKQYYCLMYGIHKSEALMRFI
EIENFDAVIVFVRTKSSSVEVTEILEKNGYNSAALNGDMSQTLRQQTLNRFKSGKFDILI
ATDIAARGLDVDRVSLVINYDVPLDAESYVHRIGRTGRAGRVGQSLLFVGRSEYKLLRNI
ERVINSVITEISLPSFDVLIARRLEKFSAQLELQLKHNDLDIYLKLLAKIRSKIDYLDTE
RLAAILLRMVQGSKRLASYFNPSVKHFVSTRNRSKRDVHGRNFAYCEKKGTLSNIYNKYQ
FGEMGLYRIELGRNHGIKISHIVGAINNNKGNINCCIGAIRLFASYSTIELPKIVSPKIL
SVFNRIRILNKPINIQFIGNVFRNSNI
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgttaataaaaaatagttcttttattaatttaggtttaaatagtttcattatcaatgct
ttgaaagatcttggttataaagaaccttctccaattcaagctaaatgtattccgcattta
ttagctggtcttgatgttctgggtatggcacaaacgggtagcggtaaaactgcagcgttt
gttttgccattattacagaatgtggattctaaattgatggccacacaagtattagttttg
actccgactcgtgaattagctattcaaattagtacagtatgttctagtttagcaaaatat
cttcctgatatctatattgttccaatatatggcggtcagcgttatgatatacaatttcgt
gctttaaataaaggggctcatattatagtaggtactcctggtaggttgttggatcattta
ggtcgtggcacattagatttaactaaattgcatagtttagtattagatgaagctgatgaa
atgttacgtatgggttttattgatgatgttgaaagtattttgttaaaaattcctgtcaag
catcaaactgctttgttttctgctacgttaccgtcagctattaggcgtattgttcatcgt
tttatgaagaatcctaaagaaatttttattcattctggaactagtgcttgttcagatatt
aagcaatattattgtttaatgtatggcatccataaaagtgaagctttaatgcgttttata
gaaattgaaaattttgatgctgttattgtttttgtacgcactaaaagttctagtgttgaa
gttactgaaatattagaaaaaaatggttataatagtgctgcattaaatggtgatatgtct
caaactttgcgtcaacagacattaaatagatttaaaagtggtaaatttgatattcttatt
gccacagatattgctgctcgtggattagatgtagatcgtgttagtttggttattaattat
gatgttcctttggatgctgaatcttatgtacatcgtattggacgtactgggcgtgctggt
cgggttggtcagtcgttgttgtttgtaggacgttctgaatataagttattgcgtaatatt
gaaagagtgattaattccgttattactgaaatttctttaccgtcgtttgatgttttaatt
gctcgtagattagaaaagttttctgcgcaactagagcttcagttgaaacataatgatttg
gatatttatcttaaattattagctaaaataaggtctaaaattgattatttagatacagag
agacttgctgctattttattaagaatggtgcaaggtagtaaaagattggcttcatatttt
aacccttcggtgaagcattttgtttcaactcgcaataggagtaagagagatgttcatggt
agaaattttgcgtattgcgaaaaaaaaggcactttatctaatatatataataaatatcaa
tttggtgaaatgggactttatcgcattgagttaggccgtaatcatggcatcaaaataagt
catattgttggagcaattaataataacaaaggaaatattaattgttgtataggagcaatt
agattatttgcttcttattccacaattgaattacctaaaattgtatctcctaaaattcta
tcagtatttaatcgtatacgtattttaaataaaccgataaatattcaatttataggcaat
gtttttcgtaattctaatatatag

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