Blochmannia endosymbiont of Colobopsis nipponica: GN160_01835
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Entry
GN160_01835 CDS
T07558
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bec
Blochmannia endosymbiont of Colobopsis nipponica
Pathway
bec03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bec00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GN160_01835 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bec03019
]
GN160_01835 (orn)
03009 Ribosome biogenesis [BR:
bec03009
]
GN160_01835 (orn)
Messenger RNA biogenesis [BR:
bec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GN160_01835 (orn)
Ribosome biogenesis [BR:
bec03009
]
Eukaryotic type
Pre-60S particles
RNases
GN160_01835 (orn)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF2175
Motif
Other DBs
NCBI-ProteinID:
QOI10777
LinkDB
All DBs
Position
complement(400437..400979)
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AA seq
180 aa
AA seq
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MNEDNLVWIDLEMTGLNPDCDRILEIATLVTDVNLNVLAEGPVLAIYQSDEQLSCMDQWN
ISTHTSTGLIDRVRKSCFSEKVSATLTLDFLKQWVPCGKSPICGNSVGQDRRFLFRYMPQ
LESYFHYHCLDVSTIRELVYRWKPVILNELMIHKTHQALDDIRNSVIELIYYRNHFLSLL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggacaacttagtttggattgatcttgagatgactgggttgaatcccgattgt
gatcgaattttggagattgccactctagtcactgatgtgaatttaaatgttcttgcagaa
ggtcctgtattagcgatatatcaatcagatgagcagttatcatgtatggatcagtggaat
attagtactcatacttctactggtttaatagatagggtcagaaaaagttgttttagtgaa
aaggtatcagctactttaacattggattttttaaaacagtgggtgccttgcggtaaatcc
ccaatttgtggtaatagtgtgggtcaagatcgtcgttttttgtttcgttatatgccgcaa
ttagaaagttattttcattatcattgtttagatgttagcacaattagagagttagtttac
cgttggaaaccagttattttaaatgagttaatgatacataaaactcatcaagcattagat
gatattcgaaattctgtaattgagttgatctattaccgtaaccattttcttagtttattg
taa
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