Blochmannia endosymbiont of Colobopsis nipponica: GN160_02250
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Entry
GN160_02250 CDS
T07558
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bec
Blochmannia endosymbiont of Colobopsis nipponica
Brite
KEGG Orthology (KO) [BR:
bec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bec03021
]
GN160_02250 (rpoH)
Transcription machinery [BR:
bec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GN160_02250 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_13
HTH_10
HTH_3
Tna_leader
Motif
Other DBs
NCBI-ProteinID:
QOI11333
LinkDB
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Position
491828..492685
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AA seq
285 aa
AA seq
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MTKDMHNLTLVSQGNLDAYIRVINTYPILTLEEERELAERLYYNGDLLAAKQLILSHLRF
VVHIARNYSGYGLPQADLVQEGNIGLMKAVRRFNPELDVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFSQIEAEMVAKELKVTSRDVREMESRMTAKDM
TFEQPVDDEYKEGFGIYPMLYLQDKAIDSFLNEDDTWNNHVTTKLHCALDSLDERSKCII
YSRWLNIDNKSTLQQLADKFGISAERVRQLEKNAMKKMRFTIEAK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
attactaaagatatgcacaatttaactttagtctctcaaggtaatttagatgcttacatc
agagtaataaatacctatcctattttgacgttggaagaggagcgtgaattagccgaaaga
ttatattacaatggtgatttattggccgctaaacaactcattttatcgcatttaagattt
gtagtccacattgcacgcaattattcaggatatggattacctcaagccgatttagtacaa
gaaggtaatattggtttaatgaaggcggtgcgtcgttttaatcctgaattagatgtacga
ttagtttcgtttgctgtacattggataaaagctgaaattcatgagtacgttttgcgaaat
tggcgtattgttaaagttgctactactaaagcgcaacgcaagttattttttaacttgcgc
aagactaaacaaagattaggttggtttagtcaaatagaggcagaaatggttgcaaaagaa
ctcaaagttactagcagagatgtacgggaaatggagtccagaatgacagctaaagatatg
acttttgaacaaccagtggatgatgagtacaaagaagggtttggcatatatcccatgtta
tatttacaagacaaagctattgattcatttctaaatgaagatgatacctggaataatcat
gttactacaaagcttcattgcgcattagatagtttagatgaacgtagtaaatgtatcatt
tactcccgttggttaaatatagataataaaagtaccttacagcaactagctgacaaattt
ggtatatctgctgaaagggtacgtcaactggaaaaaaatgctatgaaaaaaatgcgtttt
acaattgaagctaaataa
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