Blochmannia endosymbiont of Colobopsis nipponica: GN160_02590
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Entry
GN160_02590 CDS
T07558
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bec
Blochmannia endosymbiont of Colobopsis nipponica
Pathway
bec03420
Nucleotide excision repair
bec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GN160_02590
03430 Mismatch repair
GN160_02590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bec03400
]
GN160_02590
Enzymes [BR:
bec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GN160_02590
DNA repair and recombination proteins [BR:
bec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GN160_02590
MMR (mismatch excision repair)
Other MMR factors
GN160_02590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PhoH
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QOI10896
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Position
561607..563574
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AA seq
655 aa
AA seq
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MDIVSLFNKLNDKQREAVVAKDSHVLVLAGAGSGKTRVLTHRVIWLKMIKNYSSSSIMAV
TFTNKASLEMKSRINALIGDFSKGMWIGTFHGFAYCLLRSHYLDSNLPKNFQIIDRNDQI
CLLTKSIRYLGLDEKKWQPNSAVCFISDKKNKSSLFPNVDGRSSKSEITWLNIYKVYQNM
CDRAGLVDFDELLCRLYNLLLNNPAILAYYRNKFVNILVDEFQDTNKMQYNCLYLLLGEK
SNVMIVGDDDQSIYSWRGAQVDNIYRFISDFSSTRIIRLEQNYRSTNNILQTANTLISYN
QNRIAKKLWSTEGKGKTVSLYRAVNELDEAYFVINCIKAWQQKGGLLNNCAILYRSNIQS
LVLERVLLHSKIPYKIWGGSIRFFERQEIKNMFAYLRLIINKSDDVAYERILNVPPRGIG
KRTLDLVRNISITDQLTLWESTKNLLNNTKLKTRIFRVLQDFITLINFLSEEIEQLSLFD
QIDLVIKETGLFCFYKQMQGSKSTLCIESFKEILDAAHRFDQNYENRSDNISVLRDFVSY
YLLENDKDYRSSELFSDLDSVNLMTLHASKGLEFSQVFIVGMEEGIFPSQMSLLGEKQVE
EERRLAYVGITRAMHSLTISYAENRFIYGKAIICKVSRFINELPKECISNVFFSN
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggatattgtaagtttgtttaataaactgaatgataaacagcgtgaagctgttgttgct
aaagacagtcatgtactggttttagctggtgctggtagcggaaaaactcgagtattaacc
catcgtgttatttggttgaaaatgataaagaattattcttcttcttcaattatggcagta
acttttactaataaagcatcattggaaatgaagagtcgtataaacgctttaattggtgat
ttttctaaaggaatgtggataggtacatttcatggttttgcttattgtttattgcgctct
cattatttagattcgaatttgcctaaaaattttcaaataatagataggaatgatcagata
tgtttattaacgaaatctattcgttatcttggtttagatgaaaaaaaatggcaacctaat
agtgctgtatgttttattagcgataaaaaaaataaatcttctctatttcctaatgttgat
ggacgatcaagtaaatcagaaattacttggttgaatatctataaagtttatcagaatatg
tgtgatcgtgctggattagtagattttgatgaacttttatgtcgtttatataatttgtta
ctgaataatccagctattttagcttattatcgaaataagtttgttaatattttagtggat
gagtttcaagatactaataaaatgcaatataattgtttgtatttgttattaggtgaaaaa
agcaatgttatgattgttggtgatgatgatcaatcaatttatagttggcgtggcgctcag
gttgataatatttatagatttattagtgatttttcatcaacacgtattattcgtctagaa
caaaattatcgctctactaataacattttacaaacagctaatactttaatttcctataat
caaaatcgtattgctaagaagttatggagcacagaaggcaaagggaagactgtttcttta
tatagagcagtgaatgaattagatgaagcatattttgtaattaattgtataaaagcttgg
caacaaaaaggaggtttattgaataattgtgccattttgtatcgtagtaatattcaatct
cttgttttagagagagtattgttacatagtaagattccgtataagatatggggtggtagt
atcaggttttttgaacgtcaagaaattaaaaatatgttcgcgtaccttcgtttaattatt
aataaaagtgatgatgttgcatatgaaagaattcttaatgttccacctagaggtatagga
aagcgtacgttagatttagtaagaaatatatctattactgatcagttgactttatgggaa
agcactaagaatttattaaataatactaaattaaaaacaagaatttttagagtattacag
gattttattactttaattaattttttatctgaagaaattgaacagttatcattatttgat
caaatagatttagtaataaaagaaactggtttgttttgtttttacaagcaaatgcaaggt
tctaagtctacgttatgtattgagagctttaaagaaatcttagatgctgctcatcgtttt
gatcaaaattatgaaaatagaagtgataatatatctgttttgcgtgattttgtttcatat
tatttgttagaaaatgataaagattatcgtagttctgaattattttctgatcttgattct
gttaatttaatgactttacatgcttctaaaggattagaattttctcaggtatttattgtt
ggtatggaggaaggtatttttcctagtcaaatgtctttattaggagaaaagcaagtagaa
gaagaacgtagattagcttatgtaggtattacccgtgcgatgcatagtttaactattagt
tatgctgaaaatcgttttatatatggcaaagctattatatgtaaagtttcccgttttatt
aatgaattacctaaagaatgcataagtaatgtttttttttcaaattga
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