Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 675: BTURN675_104
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Entry
BTURN675_104 CDS
T03907
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bed
Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 675
Pathway
bed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTURN675_104 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bed03019
]
BTURN675_104 (pnp)
03016 Transfer RNA biogenesis [BR:
bed03016
]
BTURN675_104 (pnp)
Enzymes [BR:
bed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BTURN675_104 (pnp)
Messenger RNA biogenesis [BR:
bed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BTURN675_104 (pnp)
Transfer RNA biogenesis [BR:
bed03016
]
Prokaryotic type
tRNA degradation factors
BTURN675_104 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AKC59693
LinkDB
All DBs
Position
124060..126141
Genome browser
AA seq
693 aa
AA seq
DB search
MISPIIRQFQYGNHMLTLETGVIARQANAAVMVSMGDTAVLVTVVIDTDVQSGQDFFPLT
VHYQERSYSVGKFPGGFFRREGRPTENEILTSRLIDRPIRPLFPERFMNEVQIIATVVSV
NPQINPDILGIIGASAALSLSGVPFFGPVGAARVGYVNGQYVLNPTTDELIRSRLDLVIA
GTESSILMVESASQFLSEEEILEALIFGHRQQKLVIENIHAFVMEAGKRNCQVQIREINN
DLQLVITNLVGCRFLDAYSIVDKKSRYSKIDFIKGEVIDVLTQSDRNVDKNEISHILHDI
EKNIVRQRILQGQPRIDGRSYQMIRELDIRTGILPRTHGSALFTRGETQVLVSTTLGTER
DAQNIDELTGERIDRFLLHYNFQPYCVGEIGVVSSPKRREIGHGRLAKRGMLAVMPNMNE
FPYTIRVVSEVTESNGSSSMASICGASLSLMDAGVPIKSSVAGIAMGLVKQGDNFVVLSD
IMSDEDRLGDMDFKISGNRNGITALQMDIKNFEITYEIIGVALNQAKGARFSVLDVMDRV
IKLPRKHISSFAPRIHIIKINQDKIKNLIGKGGSVIRSLIEETKTTIEIEDDGTVQIASV
SDINVQHAIRRIKEITSELEIGVVYTGKVTHIVNFGAFVALLGGSKEGLVHISQISKNHV
DNIDDYLSVGQDILVKVLEIDRQGRVRLSMKDI
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
ttgatcagtccaattattagacagtttcagtatggtaatcatatgttaacattagagact
ggagttattgctcgtcaagcaaatgctgcagttatggtgagcatgggggataccgcagtt
cttgttactgtggtaattgataccgatgttcaatcaggacaagattttttccctttaacg
gttcattatcaggagagaagctattcagttggaaaatttccggggggtttttttcgtcga
gagggtcgtcccactgaaaatgaaattttaacatcgcgattaattgatcgacctattcgt
cctttatttccggaacgatttatgaatgaagtgcaaataattgcaacggtggtttcggta
aatccacaaataaatccagatattttaggaataattggtgcttcagctgcgttgagtttg
tcgggtgttcctttttttggtccagtgggtgcggcacgtgttgggtatgttaatgggcag
tatgttttgaatcctactacagatgaattaattcgtagtcgtttggatttagttattgct
ggcacggagagttctatattaatggtagaatctgcatcgcaatttttaagtgaagaggag
atattagaggctctcatttttggtcatcgtcaacaaaagttagttattgaaaatattcat
gctttcgttatggaggcaggcaagcgaaattgtcaagtgcaaataagagaaataaataat
gatttacagttagttataactaatttggttgggtgtcgttttttagatgcatattctatt
gttgataaaaaaagtcgttattcaaaaattgattttattaaaggtgaagttattgatgta
ttgactcaaagtgatagaaatgtggataaaaatgagatatctcatatattacatgatata
gaaaaaaatattgtcaggcagcgaattttacaaggtcagcctcgtattgatggtcgttct
tatcagatgattcgtgaattggatatacgtactggcattttgccacgaacccatggttct
gcattgttcacgcgtggagaaacacaggttttagtaagtacaacacttggtactgaacgt
gatgctcaaaatattgatgaattaactggtgagcgaattgatcgttttttattgcattat
aattttcaaccatattgtgtaggtgaaattggggtagtgagttctccaaaacggagagaa
attggacatggcaggttagcgaaacgtggtatgttagctgtcatgccaaacatgaatgag
tttccttataccatacgtgtagtttcagaagttactgagtcgaatggttcgtcttctatg
gcttctatttgtggagcatcattgtcattaatggatgcaggagtgcctattaagtcaagt
gtggctggaatagcaatgggtttagtaaagcaaggtgataattttgttgttttatctgat
attatgagtgatgaagatcgtttaggtgatatggattttaaaatttctggtaatcgtaat
ggtattacagcattgcaaatggacattaaaaattttgagattacttatgagattattggt
gtagcgttaaatcaagcgaaaggtgctcgttttagtgttttagatgttatggatcgtgtt
ataaagctgccacgaaaacatatttctagttttgctcctcgtatacatataataaaaata
aatcaggataagataaagaatttaattggaaaaggtggttcggtgatccgttctttaatt
gaggaaaccaagactactatagaaattgaagatgatggtactgttcaaatagcatctgtt
agtgatattaatgtacagcacgctattcgtcgtattaaagaaattacaagtgagcttgaa
ataggtgtagtttatactggcaaagttactcatattgttaattttggtgcttttgttgct
cttttaggtggtagtaaagaaggtttagtgcatatttctcaaatttccaaaaatcatgtg
gataatattgatgattatttaagtgtaggccaggatattttagttaaggtattagagata
gatcggcaaggtcgtgttcgtttaagtatgaaagatatttaa
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