Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 675: BTURN675_415
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Entry
BTURN675_415 CDS
T03907
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bed
Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 675
Brite
KEGG Orthology (KO) [BR:
bed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bed03032
]
BTURN675_415 (topA)
03400 DNA repair and recombination proteins [BR:
bed03400
]
BTURN675_415 (topA)
Enzymes [BR:
bed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BTURN675_415 (topA)
DNA replication proteins [BR:
bed03032
]
Prokaryotic type
DNA Topoisomerases
BTURN675_415 (topA)
DNA repair and recombination proteins [BR:
bed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BTURN675_415 (topA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Toprim
Zn_ribbon_bTOP1
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AKC59986
UniProt:
A0A0E3U437
LinkDB
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Position
complement(481585..484176)
Genome browser
AA seq
863 aa
AA seq
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MRKFLVIVESPAKAKTINKYLGNNYIVKSSFGHVRDLPSNSLFIKNQKDHRILKKNVDKL
DKKNALIHRIGIDPYHGWIAKYEILPGKEKIIDELSMLAKNSDHVYLATDLDREGEAIAW
HLQEVIQVDRKKISRVIFNEITCDAIMHSFKHPTVLNIGKVHAQQARRFMDRLVGYMLSP
LLWKKIARGLSAGRVQSVAVRLVVERERRIRNFISKEYWKLYIDLIGSIGNELRFQVVRN
GKSRFIPTTETELKQAKNILLQTDSYVISNRVDKFLFVRAHPPFVTSTLQQSASVHLGYS
IKKTMLLAQRLYEAGYITYMRTDSTNVSKSALSMVRSYIYDVFGQEYLSKKNNEYNFTSC
VQGAHEAIRPSNVCFSSESIKDKNSDLKKLYHLIRCQFIASQMSSSKDIITTLSMKIGDF
TLQFSHRICFFDGWKKIMSKIGNQSDQKEKNKFPDFKIGEVLKFKRIVATQHFTKAPVRY
NEASLVKELEKRGIGRPSTYVSIISTIQDRGYVCLYHAHFYAMKIGEIVTDRLSENFYEL
MDYQFTANMEGVLDKIADNQTEWKIVLDDFFIRFSEQLSVAEKDFEDGGMRQNSMIMTSI
VCSLCGKNMGIRVAVTGVFLSCEGYKNIVSLKSRCKNTINLVPEMLQNSIPRSNHFKCEK
CNSVMDSYFIDSCRKLHVCVNNPLCAGYNIENGEFGIQKISDFCVVQCDKCMYDMYVKFG
RFGKYMLCSNLDCKNTMKISSNDCVVPKKSLVLPLPELICEKSNAYFVLRDGKAGIFLAA
NTFPKSRETRAPFVEELVRFRDRLPKKLSYLADAPIYDIYGNKTLVRFDRKSKQQYVVSM
KDGKCTSWKSFFINGCWKIKSDK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaatttcttgttattgttgagtctccagctaaggctaaaacaattaataaatat
ttagggaataattatatagtgaaatctagttttggtcatgttagagatttaccaagtaat
agtttgtttattaaaaatcaaaaagaccacagaattttaaaaaaaaatgttgataaattg
gataaaaaaaatgcattaatacatcgtataggaattgatccatatcatggatggatagca
aaatatgaaattttgcctggaaaagagaaaattattgatgaacttagtatgttagcgaaa
aactctgatcatgtttatcttgcaactgatttagatcgtgaaggtgaagctatcgcttgg
catttgcaagaggtcattcaagtagataggaagaaaattagtcgtgttatttttaatgaa
attacatgcgatgctattatgcactcgtttaagcatccaacggtattgaatattggtaaa
gtacatgcacaacaggcacgccgatttatggatcgattagttggttatatgttatctccg
ttattatggaaaaaaattgctcgaggattatctgctggacgagtacaatctgtggcagtg
aggttggtagttgaacgtgaacgcaggataagaaattttatttctaaagaatattggaaa
ttatatattgatttaattggttctattggaaatgagttgcgttttcaagtagttcgtaat
ggaaaatctcgatttattccaactacggaaacagagttaaagcaagcaaaaaatatatta
ttgcaaactgattcttatgttattagcaatagagtagataaatttttatttgttcgggca
catcctccgtttgttacatctactttacagcaatcagctagtgtgcatttagggtacagt
ataaaaaaaacaatgttattagctcaacgattatatgaggcgggatatattacttatatg
cgtactgattcaacaaatgtcagtaaatctgcgttaagcatggtgcgttcttatatttat
gatgtatttggtcaagaatatttatctaaaaaaaataatgaatataattttacatcttgt
gtgcagggggcacatgaggctattcgaccttctaacgtgtgtttttcgtcggaatcaata
aaagataaaaattctgatttaaaaaaattataccatttaattcggtgtcaatttattgct
tctcaaatgagttcatcgaaagatattattactaccttatcaatgaaaataggagatttt
acattacagttttctcatcgaatttgtttttttgatggttggaaaaaaataatgtctaag
attggtaatcagtcggatcaaaaagagaaaaataaatttccagattttaagattggtgaa
gtattgaaatttaaaaggattgttgctactcaacatttcactaaagcacctgttcgttat
aatgaagcatctttagtaaaagagttagaaaaaagaggtattggtcgcccatctacgtat
gtttcaattatttctaccatacaggatcgtggttatgtttgtctttatcatgcacatttt
tatgccatgaaaataggtgaaattgttactgatcgtttatctgaaaatttttatgagtta
atggattatcaatttactgctaatatggaaggtgtgcttgataaaattgctgataatcag
actgagtggaaaattgttttagatgatttttttattaggttcagtgaacagttaagtgtt
gcagagaaagatttcgaggatggcggtatgcgtcagaattcgatgataatgactagtata
gtttgttcgttatgtggtaaaaatatgggaattcgggttgcggttactggtgtttttctt
agttgtgaaggttataaaaatatcgtgtctttaaaaagtagatgtaaaaatacaataaat
ttagttcctgagatgttgcaaaattcaattcctcgtagtaatcattttaaatgtgaaaaa
tgtaatagtgttatggacagttattttattgatagttgtcgtaaattacatgtttgtgtt
aataatccgttatgtgctggatataatattgaaaatggtgaatttggtatacagaagata
agtgatttttgtgttgttcagtgtgataaatgtatgtatgatatgtatgtaaagtttggt
cgttttggtaaatatatgttatgcagcaatctggattgcaaaaataccatgaaaatttca
tctaatgattgtgtggtgcctaaaaaatctttggtacttccgttaccagaacttatatgt
gaaaaatcaaatgcttattttgttcttcgggatgggaaagcagggatttttttagcggct
aataccttcccgaaatcgcgagagacgcgtgctccttttgtagaagaattggttcgtttt
cgtgatcgtttgccaaaaaagttgtcttatttggcagatgcgccaatatatgatatttat
ggtaataaaactttagttcgttttgatcgaaaaagtaaacagcagtatgttgtttcgatg
aaggatggtaagtgtactagttggaaatctttttttattaatggatgttggaaaattaaa
agtgataagtag
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