Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 675: BTURN675_538
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Entry
BTURN675_538 CDS
T03907
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bed
Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 675
Pathway
bed03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bed00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BTURN675_538 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bed03019
]
BTURN675_538 (rnc)
03009 Ribosome biogenesis [BR:
bed03009
]
BTURN675_538 (rnc)
03036 Chromosome and associated proteins [BR:
bed03036
]
BTURN675_538 (rnc)
Enzymes [BR:
bed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BTURN675_538 (rnc)
Messenger RNA biogenesis [BR:
bed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BTURN675_538 (rnc)
Ribosome biogenesis [BR:
bed03009
]
Eukaryotic type
90S particles
RNase
BTURN675_538 (rnc)
Prokaryotic type
rRNA processing factors
BTURN675_538 (rnc)
Chromosome and associated proteins [BR:
bed03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BTURN675_538 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AKC60101
LinkDB
All DBs
Position
complement(635044..635730)
Genome browser
AA seq
228 aa
AA seq
DB search
MISTSLLNKLQKDIGYIFKKCELLIQAMTHCSASNTHNERLEFLGDSILNYVIAYVLYQK
FPSVTEGDMSRMRASLVQEHTLAEIARNFSIGDCLCLGYGELKTGGAQRESILSDTIEAL
IGAIFLDSDIYVVEKVIVNWYMVRLTLIMPGDQQKDPKTRLQEYLQYHRYPLPIYWISQI
TGESHNQKFIVYCQVYGLKSPVIGCGSSRRRAEQDAASCVLRILEVSV
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgacttctttattgaataaattgcaaaaagatattggatatatttttaagaag
tgtgaattgcttattcaagcaatgacacattgtagtgctagtaatacacataatgaacgt
ttagaatttttaggtgatagtattttaaattatgttattgcgtatgttttatatcagaaa
tttccaagtgttactgaaggtgatatgagtaggatgcgggcatctttagtacaagaacat
actttagcggaaatagctcgtaatttttctataggggattgtctttgtttagggtatgga
gagttaaaaacaggaggtgctcagcgagaatctattttgtctgatacaatagaggcatta
ataggtgctatttttttagatagtgatatttatgttgtagagaaagtgattgttaattgg
tatatggtgcgtttaactttaattatgcctggtgatcaacagaaggatccaaaaactcgt
ctgcaagaatacttacaatatcatcgttatcctttgccaatatactggatcagtcaaatt
actggtgagtcgcataatcaaaaatttattgtttattgtcaagtatatggtttaaaatct
ccggttattggatgtggatctagtcgaagaagagctgaacaagacgcagctagttgtgtt
cttagaattttagaggtttcggtttaa
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