Bacteroides eggerthii: INE88_00550
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Entry
INE88_00550 CDS
T07755
Symbol
algU_2
Name
(GenBank) RNA polymerase sigma-H factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
beg
Bacteroides eggerthii
Pathway
beg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
beg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
INE88_00550 (algU_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
beg03021
]
INE88_00550 (algU_2)
Transcription machinery [BR:
beg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
INE88_00550 (algU_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
UPF0122
HTH_11
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QUT43768
LinkDB
All DBs
Position
complement(573280..573897)
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AA seq
205 aa
AA seq
DB search
MMEFMDEALFLSEIRKDNEDAFAFLFKKSFPRLLGYAVRFVENEEVALDIVQECFLNFWE
KRNLLVAVSVTSLLFAMVRNSCLNYLKHEAVVEKHRIEYLAKVGGEERLYYADFAPDAGY
GLLYEELEQQIKSVIDNLPERCREVFVLSRFENLKNREIAEQLRISTTAVEKQIAKALDI
FARHFKEKYPMDVCIVVLAWLIDCK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgatggaattcatggatgaagcgttatttctgtccgaaatcaggaaagataacgaagac
gcttttgcttttcttttcaagaaatcttttccgcgtttgcttggatatgctgtccgtttt
gtagagaatgaggaagttgcattggatattgttcaggaatgtttcctgaacttctgggag
aagcgtaatctcctggttgctgtatccgtaacttccttactgtttgctatggtacggaat
agttgcctgaactacttgaagcatgaggcggtggtggaaaagcaccggatagagtatttg
gctaaggtggggggagaagaacggctgtactacgccgactttgcacccgatgccggatac
gggttgctgtatgaagagttggagcagcagataaagtcggtgatagataatttgcccgaa
cgttgtcgtgaggtatttgtcctaagcaggtttgagaatttaaagaatagggaaatcgcc
gaacagttgcgaatatcgactactgcggtggagaagcagatagccaaagctttggatatc
tttgctcggcattttaaggagaaatacccgatggacgtctgtatcgtcgttttggcatgg
cttatcgattgtaaatga
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