KEGG   Bacteroides eggerthii: INE88_00550
Entry
INE88_00550       CDS       T07755                                 
Symbol
algU_2
Name
(GenBank) RNA polymerase sigma-H factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
beg  Bacteroides eggerthii
Pathway
beg02020  Two-component system
Brite
KEGG Orthology (KO) [BR:beg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    INE88_00550 (algU_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:beg03021]
    INE88_00550 (algU_2)
Transcription machinery [BR:beg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     INE88_00550 (algU_2)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 GerE UPF0122 HTH_11 HTH_24
Other DBs
NCBI-ProteinID: QUT43768
LinkDB
Position
complement(573280..573897)
AA seq 205 aa
MMEFMDEALFLSEIRKDNEDAFAFLFKKSFPRLLGYAVRFVENEEVALDIVQECFLNFWE
KRNLLVAVSVTSLLFAMVRNSCLNYLKHEAVVEKHRIEYLAKVGGEERLYYADFAPDAGY
GLLYEELEQQIKSVIDNLPERCREVFVLSRFENLKNREIAEQLRISTTAVEKQIAKALDI
FARHFKEKYPMDVCIVVLAWLIDCK
NT seq 618 nt   +upstreamnt  +downstreamnt
atgatggaattcatggatgaagcgttatttctgtccgaaatcaggaaagataacgaagac
gcttttgcttttcttttcaagaaatcttttccgcgtttgcttggatatgctgtccgtttt
gtagagaatgaggaagttgcattggatattgttcaggaatgtttcctgaacttctgggag
aagcgtaatctcctggttgctgtatccgtaacttccttactgtttgctatggtacggaat
agttgcctgaactacttgaagcatgaggcggtggtggaaaagcaccggatagagtatttg
gctaaggtggggggagaagaacggctgtactacgccgactttgcacccgatgccggatac
gggttgctgtatgaagagttggagcagcagataaagtcggtgatagataatttgcccgaa
cgttgtcgtgaggtatttgtcctaagcaggtttgagaatttaaagaatagggaaatcgcc
gaacagttgcgaatatcgactactgcggtggagaagcagatagccaaagctttggatatc
tttgctcggcattttaaggagaaatacccgatggacgtctgtatcgtcgttttggcatgg
cttatcgattgtaaatga

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