Bacteroides eggerthii: INE88_02851
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Entry
INE88_02851 CDS
T07755
Symbol
ribD_2
Name
(GenBank) Riboflavin biosynthesis protein RibD
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
beg
Bacteroides eggerthii
Pathway
beg00240
Pyrimidine metabolism
beg01100
Metabolic pathways
beg01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
beg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
INE88_02851 (ribD_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
beg02044
]
INE88_02851 (ribD_2)
Enzymes [BR:
beg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
INE88_02851 (ribD_2)
Secretion system [BR:
beg02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
INE88_02851 (ribD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC_N
APOBEC2
APOBEC3
APOBEC4_like
NAD1
APOBEC1
NAD2
XOO_2897-deam
Motif
Other DBs
NCBI-ProteinID:
QUT46025
UniProt:
A0A380YHT6
LinkDB
All DBs
Position
complement(3323268..3323705)
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AA seq
145 aa
AA seq
DB search
MDETTKNKQEALDKRYIRMASIWAENSYCQRRQVGALIVKDKMIISDGYNGTPSGFENVC
EDENNITKPYVLHAEANAITKIARSNNSSNGATMYVTASPCIECAKLIIQAGIKRVVYSE
KYRLEDGINLLKRAGIEVVFVSVEN
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaactacgaaaaacaaacaagaagcgttggacaaacgttatatacgcatggca
agtatctgggcggaaaactcttactgccaacggcgccaggtcggtgcactcatcgtaaaa
gataaaatgattatctctgacgggtacaacggcacgccttccggatttgaaaatgtatgc
gaggacgaaaacaacattaccaaaccgtacgttctccacgccgaagccaatgccattacc
aaaatagcacgctccaacaacagcagcaacggcgccacgatgtacgttacggcatctccc
tgcattgaatgtgccaaactcatcatccaagcaggcatcaaacgtgttgtatactctgaa
aaataccgcttggaagacggtatcaatctattgaaacgggcaggtatcgaagtggtattc
gtttcagttgagaattga
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