Bacteroides eggerthii: INE88_04394
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Entry
INE88_04394 CDS
T07755
Symbol
hup_3
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
beg
Bacteroides eggerthii
Brite
KEGG Orthology (KO) [BR:
beg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
beg03032
]
INE88_04394 (hup_3)
03036 Chromosome and associated proteins [BR:
beg03036
]
INE88_04394 (hup_3)
03400 DNA repair and recombination proteins [BR:
beg03400
]
INE88_04394 (hup_3)
DNA replication proteins [BR:
beg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
INE88_04394 (hup_3)
Chromosome and associated proteins [BR:
beg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
INE88_04394 (hup_3)
DNA repair and recombination proteins [BR:
beg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
INE88_04394 (hup_3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QUT47541
UniProt:
A0A414M7H4
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All DBs
Position
pMMCAT_CL11T00:60218..60502
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AA seq
94 aa
AA seq
DB search
MTKSEIVKEISARTGIDGKAVLAVLEGFMNEVKTSLGKEENVYLRGFGSFIVKKRAQKTA
RNISKNTTMIIPAHNIPAFKPSDEFLKMVKQQNA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatcggaaatcgtaaaggaaatatctgccagaaccggcatcgacggcaaagcg
gtgcttgctgttttggaaggattcatgaacgaggtaaagacttcgttgggtaaggaggaa
aatgtctatcttcgtggattcggtagtttcatagtgaagaagagagcgcaaaagacagct
cggaatatctctaagaatactactatgattattccggctcataacataccggcatttaaa
ccgtctgacgaatttttgaaaatggtaaaacaacagaacgcataa
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