Barrientosiimonas endolithica: GCM100_01650
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Entry
GCM100_01650 CDS
T09132
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bei
Barrientosiimonas endolithica
Pathway
bei03030
DNA replication
bei03430
Mismatch repair
bei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM100_01650
03430 Mismatch repair
GCM100_01650
03440 Homologous recombination
GCM100_01650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bei03032
]
GCM100_01650
03400 DNA repair and recombination proteins [BR:
bei03400
]
GCM100_01650
Enzymes [BR:
bei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM100_01650
DNA replication proteins [BR:
bei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM100_01650
DNA repair and recombination proteins [BR:
bei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM100_01650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_30
AAA_14
Rad17
AAA_16
Mg_chelatase
AAA_18
AAA_19
AAA_28
zf-CXXC
AAA_2
TsaE
Motif
Other DBs
NCBI-ProteinID:
BDZ56508
LinkDB
All DBs
Position
171682..174648
Genome browser
AA seq
988 aa
AA seq
DB search
MSTALYRRYRPETFQDVIGQEHVTEPLMQALRSGRIGHAYLFSGPRGCGKTTSARILARC
LNCAKGPTPTPCGECESCVALARGGSGSVDVIEIDAASHGGVDDARDLRERASYGPAQSR
YKIYIIDEAHMVTPQGFNALLKIVEEPPEHVKFVFATTEPEKVIGTIRSRTHHYPFRLLP
PGLLGDYLQTLCDAEGVPVEPGVLSFVTRAGGGSARDSLSVLDQLIAGSGEEGLTYAGAA
ALLGFTDGELLDAIIDAFAAHDAAAVFRQIDKVVESGHDPRRFVEDLLERLRDLIVVSAV
ADGAAQVLRHVPEDQLERMRQQAAAFGPGTLSRAADIANAGLTEMTGATAPRLQLELIAA
RILLPAASGEQGYAARLDRLERRLDLGGGDQPQAGRGGGEERAVGDHAGRVGGEERAAVS
RPPAPGRTESGEDVRRESGAQAPSPEPGGWPDDGPVEPAASERPSPPDRAQLDREAASGR
PGEPAQGQGCPASDEQGPSGTSSDASRSPEPSAPTGSGGPGGQGDSGGRGDSASAEPAPA
AAPQRTPGSIDTDAIRRAWPDVLDRIFKIKRVTWTLLSQHAQVLDYDGQRLLLGTSTQGL
TDAFRRGQHPEVVRQALIEGIGVDCRIEVTVHDGPPPQGRPAPGDGGPSGGFGGGPEQPW
GGGNQGGGSPGGGPHGGGGAPGGPDQGGSGPSAGGSAPSGAQGRSGPGGGPAGPNAGPAA
GGRGGGPAGPNDGPGAGGRGGGPGAAGGGPGGPQPPRQAPAPGGWDADSRDSWSSPSAAP
PAWATDEGDGAGDAAAGRPGDGPGAASSGGLSSGAPGRPGDASAPGAPGGPEQGGSAGGP
SAPAPASPTTGPSMAETARREDVQPAPAPPGASPETTRTRPPQPDDDAGPDGPGPASGSP
APAPGAQPTPGAQPTPGAQPDAASQPSPRRRAEAAAKAQAAAAADPRRPGADDSAATYDD
ESVEDAGAVGVPVIQSVLGGTVIAEEED
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgccctctatcgccgctaccgccccgagacgttccaggacgtcatcggccag
gagcacgtcaccgagccgctgatgcaggcgctgcggtcgggccgcatcggccacgcctac
ctgttcagcggcccgcgcgggtgcggcaagacgaccagcgcgcgcatcctggcgcgctgc
ctcaactgtgcgaaggggccgacgccgaccccgtgcggcgagtgcgagtcgtgcgtagcg
ctggcgcgcggcgggtcggggtcggtcgacgtcatcgagatcgacgcggccagccacggc
ggtgtcgacgacgcgcgtgacctgcgcgagcgggcgtcctacggcccggcgcagagccgc
tacaagatctacatcatcgacgaggcccacatggtcacgccgcagggcttcaacgccctg
ctcaagatcgtcgaggagccgcccgagcacgtgaagttcgtcttcgcgacgaccgagccc
gagaaggtcatcgggacgatccgctcgcgcacccaccactacccgttccggctgctgccg
cccggtctgctcggcgactacctgcagaccctctgcgacgcggagggcgtgccggtcgag
ccgggcgtgctgtcgttcgtcacgcgcgccggcggcggctccgcgcgtgactcgctgtcg
gtgctcgaccagctcatcgccgggtcgggcgaggaggggctgacgtacgccggcgcggcc
gcgctgctcggcttcaccgacggtgagctgctcgacgcgatcatcgacgccttcgccgcc
cacgacgccgcggcggtgttccggcagatcgacaaggtcgtcgagtcgggtcacgacccg
cgccggttcgtcgaggacctgctggagcggctgcgcgacctgatcgtcgtctcggcggtg
gccgacggcgcggcccaggtgctgcggcacgtgcccgaggaccagctggagcgcatgcgg
cagcaggccgcggcgttcggccccggcacgctgtcccgcgcggccgacatcgccaacgcc
ggcctcaccgagatgaccggcgcgaccgcgccccgcctgcagctggagctcatcgcggcc
cgcatcctgctccccgccgcctccggcgagcaggggtacgccgcccgcctggaccgcctc
gagcgccgcctggacctgggtggtggggatcagccgcaggctggtcggggaggcggcgag
gaacgagccgttggcgatcacgctggtcgagtaggcggcgaggaacgagccgccgtatcg
agaccaccggcgccgggacggaccgagtccggcgaggacgtacgtcgggagtcgggtgcg
caggcaccctcgcccgagccgggtggctggccggacgacgggccggtcgagcccgccgcg
tccgagcgcccttcgccgccggaccgcgcgcagctggatcgcgaggcggcctcaggccga
ccgggcgagccggcccaggggcaggggtgccccgcctccgacgagcaggggccgagcggg
acctccagcgatgcctcccggtcgccggagccgagcgcaccgaccgggtcgggcggcccg
ggcggtcagggggactcgggtggccggggcgactcggcctcggcagagccggccccggcc
gccgcgccgcagcggaccccgggctcgatcgacaccgacgcgatccgccgggcctggccc
gacgtgctcgaccggatcttcaagatcaagcgggtcacctggacgctgctgagccagcac
gcccaggtgctcgactacgacggccagcggctgctgctcggcaccagcacccagggcctc
accgacgccttccggcgcgggcagcacccggaggtggtgcggcaggcgctgatcgagggc
atcggggtcgactgccgcatcgaggtgaccgtgcacgacggtccgccgccgcaggggcgc
ccggccccgggtgacggcggacctagcggcggcttcggtggcggccccgagcagccgtgg
ggcggtggcaaccagggtggtggcagcccgggcggcgggccgcacggtggcggtggcgcc
ccgggcggtcccgaccagggcggtagcggaccgtcggccggcggctccgcgccctccggg
gcgcagggtcgctcaggcccgggcggtggtccggccggcccgaatgctggtccagccgct
ggcggccgaggcggtggtccggccggcccgaacgatggtcccggcgctggcggccggggc
ggcggtcccggtgcggccggcggtggcccgggtggtccgcagccgccgcgccaggcgccc
gcccccggtggttgggacgccgactcccgcgacagctggagctctccgtcagccgcgccg
cccgcgtgggcgaccgacgagggcgacggcgcaggcgacgctgcggccggtcggcccggc
gacggtccgggcgccgcgagctccggcggcctgagctccggcgcgccgggccgcccaggc
gacgcctcggcacccggtgcaccgggcggccccgagcagggcggttccgccggcgggccg
tcggctcctgcaccggcatcgccgaccaccggcccgtcgatggccgagaccgcgcgccgg
gaggacgtgcagcctgcgcccgcgccgccgggagcctcgcccgagacgacccgcacccgg
cccccgcagcccgacgacgacgcggggcccgacggccccggcccggcgtccggctccccg
gcacccgcgccaggtgcgcagcccacgccaggtgcgcagcccacaccgggtgcgcagccc
gacgccgcctcgcagccctcgccgcgccgccgggccgaggcggccgccaaggcccaggcc
gcggcggcggccgacccgcgtcggcccggcgccgacgacagcgccgccacctacgacgac
gagagcgtcgaggacgcgggtgcggtgggcgtacccgtcatccagagcgtcctcggcgga
acggtcattgccgaggaagaggactga
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