Barrientosiimonas endolithica: GCM100_03130
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Entry
GCM100_03130 CDS
T09132
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
bei
Barrientosiimonas endolithica
Pathway
bei03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GCM100_03130 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bei03400
]
GCM100_03130 (ku)
DNA repair and recombination proteins [BR:
bei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GCM100_03130 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
BDZ56656
LinkDB
All DBs
Position
308469..309479
Genome browser
AA seq
336 aa
AA seq
DB search
MRAIWKGAVSFGLVNVPVKLYSATENHDVQFRQVHREDGGRIRYRRVCSIDGEEVAYDDI
AKGYETEDGEMVVLTDDDLAELPTSSSREIAVDKFVPTEQIDPMLFDKSYYLEPDKAAVK
PYVLLREALSQADRVALVTVSLRTRMTVAVLRVHDDVITLQTLLWPDELRQADFGVLSEA
ADEEVKPAEQAMAQMLVESLAGDYDPEEYEDDYAAAVQELVQTKLEGGEVKAAPEPEEAG
AEVVDLLAALQQSVARAKKGRGEDVPDEVAEVGDAGEPGEAAEEAPAKKAAAKKSPAKKT
ATSKAPAKKTAAKKSTAKKSTAKKSPAKKSASKKAS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcgagccatctggaagggcgccgtctcgttcggcctggtcaacgtgccggtgaagctc
tactccgccaccgagaaccacgacgtgcagttccgccaggtgcaccgggaggacggcggc
cggatcagatatcgccgggtctgctcgatcgacggcgaagaggtcgcctacgacgacatc
gccaaggggtatgagaccgaggacggcgagatggtcgtgctcaccgacgacgacctcgcc
gagctccccacgagcagcagccgtgagatcgcggtcgacaagttcgtgcccaccgagcag
atcgacccgatgctgttcgacaagtcctactacctcgagcccgacaaggccgcggtgaag
ccctacgtgctgctgcgcgaggccctcagccaggcggatcgcgttgcgctcgtgacggtt
tcgctgcgcacccggatgaccgtcgcggtgctgcgcgtgcacgacgacgtcatcacgctg
cagacgctgctgtggcccgacgagctgcgccaggccgacttcggggtgctctccgaggcg
gccgacgaggaggtcaagccggccgagcaggcgatggcccagatgctcgtcgagtcgctc
gcgggcgactacgaccccgaggagtacgaggacgactacgccgccgccgtccaggagctg
gtccagaccaagctcgagggcggcgaggtcaaggccgcccccgagccggaggaggccggc
gcagaggtggtcgacctgctcgccgcgctgcagcagagcgtcgcccgcgccaagaagggc
cgcggcgaggacgtgcccgacgaggtcgctgaggtgggggatgcgggcgagcccggggag
gccgccgaggaggcgccggcgaagaaggctgcggcgaagaagtcccccgccaagaagacg
gcgacctcgaaggccccggccaagaagacggcggcgaagaagagcaccgccaagaagtcc
accgcgaagaagagcccggcgaagaagtcggcgagcaagaaggccagctga
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