Barrientosiimonas endolithica: GCM100_06510
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Entry
GCM100_06510 CDS
T09132
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bei
Barrientosiimonas endolithica
Pathway
bei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GCM100_06510 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bei03021
]
GCM100_06510 (rpoA)
03400 DNA repair and recombination proteins [BR:
bei03400
]
GCM100_06510 (rpoA)
Enzymes [BR:
bei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GCM100_06510 (rpoA)
Transcription machinery [BR:
bei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GCM100_06510 (rpoA)
DNA repair and recombination proteins [BR:
bei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GCM100_06510 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BDZ56994
UniProt:
A0ABN6YJ52
LinkDB
All DBs
Position
616330..617364
Genome browser
AA seq
344 aa
AA seq
DB search
MLIAQRPTLSEDVVSENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSLRIDGVQ
HEFSTVPGVKEDVTEIILNIKGLVVSSEHDEPVVMYLRKQGPGAVTAADIAPPAGVEVHN
ADLHIATLNDKGKLEMELTVERGRGYVSAQQNKSADNEIGRIPVDSIYSPVLAVTYKVEA
TRVEQRTDFDKLIVDVETKNSMAPRDAMASAGKTLVELFGLARELNVEAEGIDMGPSPTD
AALAADLALPIEDLELTVRSYNCLKREGIHSVGELVGRSEADLLDIRNFGAKSIDEVKDK
LREMGLQLKDSPPGFDASAIADRYEDDDLQGEGDDASFAEDEQY
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgccccaccctcagcgaggacgttgtctccgagaaccggtcccgg
ttcgtcatcgagccgctggagccgggcttcggctacacgctcggcaactccctgcgtcgt
acgctgctctcctcgatccccggtgcctcggtcacgagcctgcggatcgacggtgtgcag
cacgagttctccacggtccccggggtcaaggaggacgtcaccgagatcatcctcaacatc
aagggcctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggccccggcgcggtcaccgctgccgacatcgcgccgcccgccggtgtcgaggtgcacaac
gccgacctgcacatcgcgaccctgaacgacaagggcaagctcgagatggagctgaccgtc
gagcgcggccgcggctacgtctcggcgcagcagaacaagtcggccgacaacgagatcggc
cgcatcccggtcgactcgatctacagcccggtgctggccgtgacctacaaggtcgaggcc
acccgagtcgagcagcgcaccgacttcgacaagctcatcgtcgacgtcgagaccaagaac
tcgatggccccgcgcgacgcgatggcctccgccggcaagaccctggtcgagctgttcggc
ctggcccgcgagctcaacgtcgaggccgagggcatcgacatgggcccgtcgccgaccgac
gcggccctggccgccgacctggcgctgccgatcgaggacctcgagctgaccgtgcggtcc
tacaactgcctcaagcgcgagggcatccacagcgtgggtgagctcgtgggtcgcagcgag
gccgacctgctcgacatccgcaacttcggggccaagtcgatcgacgaggtcaaggacaag
ctgcgcgagatgggtctgcagctcaaggacagcccgcccgggttcgacgcgagcgccatc
gccgaccgttacgaggacgacgacctgcagggcgagggcgacgacgccagcttcgccgag
gacgagcagtactga
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