Barrientosiimonas endolithica: GCM100_10940
Help
Entry
GCM100_10940 CDS
T09132
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bei
Barrientosiimonas endolithica
Pathway
bei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCM100_10940 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bei03019
]
GCM100_10940 (pnp)
03016 Transfer RNA biogenesis [BR:
bei03016
]
GCM100_10940 (pnp)
Enzymes [BR:
bei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GCM100_10940 (pnp)
Messenger RNA biogenesis [BR:
bei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GCM100_10940 (pnp)
Transfer RNA biogenesis [BR:
bei03016
]
Prokaryotic type
tRNA degradation factors
GCM100_10940 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
BDZ57437
UniProt:
A0ABN6YNB0
LinkDB
All DBs
Position
1035750..1038317
Genome browser
AA seq
855 aa
AA seq
DB search
MEGPEITFAEAVIDNGSFGKRTVRFETGRLAKQAAGAVVCYLDDDTTLLSTTAAGKSPKD
HFDFFPLTVDVEERMYAAGKIPGSFFRREGRPSTDAILTCRLIDRPLRPAFVKGLRNEVQ
VVITVLSLNPDHQYDVLAINGASASTQISGLPFSGPIGATRVSLIDGQWVAFPNFSDIER
STFDMVVAGRIVGDDVAIMMVEAESTESTWDLVTNQGKQAPTEEVVAQGLEESKKFIRVL
CEAQQELAGQAAKEVQEFPLFLDYEDDAYQAVEQASEGKLRELLSIADKQDRESQLDAYK
DELKADLAGEGTSFEGREKEISAAYRAVQKKLVRERILREQVRIDGRGPKDIRALSAEVE
VLPRVHGSAIFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGR
VGSPKRREVGHGALAERALVPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTLSLLN
AGVPLRAPVAGIAMGLVSAEIDGATQYLALTDILGAEDAFGDMDFKVAGTREFVTAIQLD
TKLDGIPATELATALTQAHDARMHILDVMNEAIDAPDEMSPYAPRVIAVKVPVDKIGEVI
GPKGKMINQIQEDTGADISIEDDGTVYIGATDGPSAEAARAAINAIANPQMPEVGERFLG
TVVKTTTFGAFVSLLPGKDGLLHISEVRKLVGGKRIDAVEDVLGVGQKVQVELKEIDPRG
KLSLAVVQDESAAQGEGDAAAPAQDQAPAGDAQESGESDDSDGSGASADSGESGESGDKP
RRERSRDDEGGERPRRRRRGGRGRGRGEGNGDGNGEGNVSADDSADDSDRPAVSSDDVEP
GSEPANVGGASSEDA
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggagggtccagagatcactttcgccgaagccgtcatcgacaacggcagcttcggcaag
cgcaccgtccgcttcgagacgggtcggctggccaagcaggccgccggcgctgtcgtctgc
tacctcgacgacgacacgacgctgctgtccaccacggccgcgggcaagtcgcccaaggac
cacttcgacttcttcccgctgacggtcgacgtcgaggagcggatgtacgccgcgggcaag
atccccggcagcttcttccgtcgcgagggtcgcccctcgaccgacgcgatcctcacctgc
cggctgatcgaccggccgctgcgcccggccttcgtcaaggggctgcgcaacgaggtccag
gtcgtcatcaccgtgctgtcgctcaaccccgaccaccagtacgacgtgctcgccatcaac
ggcgcgtcggcctcgacccagatctcgggcctgccgttcagcggcccgatcggcgccacc
cgcgtgtcgctgatcgacggtcagtgggtcgcgttccccaacttctccgacatcgagcgc
tcgacgttcgacatggtcgtcgccggccgcatcgtgggtgacgacgtcgccatcatgatg
gtcgaggcggagtcgaccgagtccacctgggacctggtgaccaaccagggcaagcaggcg
ccgaccgaggaggtcgtcgcccaggggctcgaggagtccaagaagttcatccgggtgctc
tgcgaggcgcagcaggagctggccgggcaggccgccaaggaggtccaggagttcccgctg
ttcctcgactacgaggacgacgcctaccaggcggtcgagcaggcctccgagggcaagctg
cgcgagctgctgtcgatcgccgacaagcaggaccgcgagagccagctcgacgcgtacaag
gacgagctcaaggccgacctggccggcgagggcacctcgttcgagggtcgcgagaaggag
atctcggcggcctaccgcgcggtgcagaagaagctcgtgcgcgagcggatcctgcgcgag
caggtgcgcatcgacggccgcggccccaaggacatccgggcgctgtcggccgaggtcgag
gtgctcccgcgggtgcacggctcggcgatcttcgagcgcggcgagacccagatcctcggc
gtgaccacgctgaacatgctccgcatggagcagcagctcgacacgctgtcgccggtcacc
cgcaagcgctacatgcacaactacaacttcccgccctactccaccggtgagaccggtcgg
gtcgggtcgccgaagcggcgcgaggtcggtcacggggcgctcgccgagcgcgcgctcgtg
ccggtgctgccgacgcgcgaggagttcccgtacgccatccgtcaggtgtccgaggcgctc
agctccaacgggtcgacctcgatgggttcggtctgcgcctcgaccctgtcgctgctcaac
gccggtgtgccgctgcgcgcgccggtcgccggcatcgcgatgggtctggtgtccgccgag
atcgacggtgcgacgcagtacctcgcgctcaccgacatcctcggtgccgaggacgcgttc
ggcgacatggacttcaaggtcgccggcacccgcgagttcgtcacggccatccagctcgac
accaagctcgacggcatccccgccaccgagctggccacggcgctgacccaggcccacgac
gcgcggatgcacatcctcgacgtcatgaacgaggccatcgacgcacccgacgagatgagc
ccgtacgccccgcgcgtcatcgcggtgaaggtgccggtcgacaagatcggcgaggtcatc
ggccccaagggcaagatgatcaaccagatccaggaggacaccggcgccgacatctcgatc
gaggacgacggcaccgtctacatcggcgccaccgacggcccgtcggccgaggccgcgcgt
gcggcgatcaacgcgatcgccaacccgcagatgcccgaggtcggcgagcgcttcctcggc
accgtggtgaagacgacgaccttcggggcgttcgtctcgctgctgccgggcaaggacggc
ctgctgcacatctccgaggtgcgcaagctggtcggtggcaagcggatcgacgcggtcgag
gacgtcctcggcgtcggccagaaggtccaggtcgagctcaaggagatcgacccccgcggc
aagctctcgctcgccgtggtgcaggacgagtcggccgcgcagggtgagggcgatgccgcc
gcccccgcgcaggaccaggccccggccggggacgcgcaggagtccggcgagtccgacgac
tccgacggctccggggcgtcggctgactccggcgagtccggcgagtccggcgacaagccg
cgccgcgagcgctcgcgcgacgacgagggcggcgagcgtccgcgccgtcgtcgccgcggt
ggccgtggccgtggccgcggtgagggcaacggtgacggcaacggcgagggcaacgtctcc
gccgacgactccgcggacgacagcgaccgcccggcggtcagctccgacgacgtcgagccc
ggctccgagccggccaacgtcggcggcgcctcgtccgaggacgcctga
DBGET
integrated database retrieval system
