Barrientosiimonas endolithica: GCM100_14090
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Entry
GCM100_14090 CDS
T09132
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bei
Barrientosiimonas endolithica
Pathway
bei03030
DNA replication
bei03430
Mismatch repair
bei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM100_14090 (dnaQ)
03430 Mismatch repair
GCM100_14090 (dnaQ)
03440 Homologous recombination
GCM100_14090 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bei03032
]
GCM100_14090 (dnaQ)
03400 DNA repair and recombination proteins [BR:
bei03400
]
GCM100_14090 (dnaQ)
Enzymes [BR:
bei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM100_14090 (dnaQ)
DNA replication proteins [BR:
bei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM100_14090 (dnaQ)
DNA repair and recombination proteins [BR:
bei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM100_14090 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
UVR
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BDZ57752
UniProt:
A0ABM8HA00
LinkDB
All DBs
Position
complement(1328642..1330426)
Genome browser
AA seq
594 aa
AA seq
DB search
MTTPLPVQATFDDLGTPLHEVTFVVVDLETTGGSPLASEITEIGAVKVRGGEQLGEFQTL
VNPGLPIPAFISVLTGITDRMVADAPRIETALPAFLEFARGAVLVAHNAPFDITFLKTNA
QRLGLEWPGPRVIDTAHLARQLVTRDEAPNRKLGSLARLFQASTTPDHRALHDARATVDV
LHGLLGRVGSLGVTTLEELSSYSSRVSPAQRRKRFLADSLPSAPGVYVFKDGQQRPLYVG
TSVDIRRRVRTYFTASEHRTRMAEMVGIAESVTPIVCATPLEAEVRELRLIAEHKPRYNR
RSRFPERAVWVKLTVEPFPRLSVVREVRDDGARYVGPFSGRKQAEQAVAAVHEVVPLRQC
TTRLSPAKPTAACVLAELGRCGAPCTGQQSVADYDAVVSQVTAALTGDAEPLVRALEQRM
AELAEQERYEDAGSVRDRLLTLVRGTARAQRLAPLAASPELVGARWRAEGGWEIVCVRYG
RLAGTAVAARGTDPMLTVEAVRASAEVVAPPTGPVPAALPEETEKILRWLETPGTRLVSL
DGEWTCPVNGAGRSRDRLEPLVRSQEQVAGFDEPRGRTLHRPPGAVASGAAAAG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccccgctgccggtgcaggccacgttcgacgatctcggcaccccgctgcacgag
gtgaccttcgtcgtcgtcgacctcgagaccaccggcggcagcccgctcgccagcgagatc
accgagatcggcgcggtcaaggtgcgtggcggcgagcagctcggcgagttccagaccctg
gtcaaccccggtctgccgatcccggcgttcatctcggtgctcaccggcatcaccgaccgc
atggtcgccgacgcgccccgcatcgagaccgcgctgccggccttcctggagttcgcccgc
ggcgccgtcctggtggcccacaacgcacccttcgacatcaccttcctcaagaccaacgcc
cagcgcctggggctggagtggcccggcccacgggtgatcgacaccgcgcacctcgcgcgg
cagctggtcacccgcgacgaggcgcccaaccgcaagctcggcagcctggcccggctcttc
caggcgagcacgacccccgaccaccgcgcgctgcacgacgcccgcgccacggtcgacgtg
ctgcacggtctgctcgggcgggtcggcagcctgggcgtgacgacgctcgaggagctgtcg
tcctactcctcccgggtcagcccggcccagcgccgcaagcgcttcctcgccgacagcctg
ccctccgccccgggggtctacgtcttcaaggacggccagcagcgcccgctctacgtcggc
acgtccgtcgacatccggcgccgggtccgcacgtacttcacggccagcgagcaccgcacc
cggatggccgagatggtcggcatcgccgagagcgtcaccccgatcgtgtgcgccacaccg
ctcgaggccgaggtgcgcgagctgcggctcatcgccgagcacaagccgcgatacaaccgc
cgcagccgtttccccgagcgggcggtgtgggtcaagctcaccgtcgagccgttccctcgg
ttgtcggtggtgcgcgaggtgcgcgacgacggcgcccgctacgtcggcccgttctccggc
cgcaagcaggccgagcaggcggtggccgcggtgcacgaggtcgtgccgctgcgccagtgc
accacgcggttgtccccggccaagccgacggcggcgtgcgtgctcgccgagctcggccgg
tgcggcgcgccgtgcaccggtcagcagtcggtcgccgactacgacgcggtcgtctcgcag
gtcaccgcggcgctcaccggcgacgccgagccgctcgtgcgcgcgctcgagcagcggatg
gccgagctggccgagcaggagcgctacgaagacgccggctcggtgcgcgaccggttgctg
accctcgtgcggggcaccgcccgggcccaacgcctggcgccgctcgcggcgagccccgag
ctggtcggcgcccggtggcgggccgagggcggctgggagatcgtctgcgtgcgctacggc
cggctcgccggcaccgcggtggcggccaggggcaccgacccgatgctcaccgtcgaggcg
gtgcgggccagcgccgaggtcgtcgcgccaccgaccggcccggtcccggccgcgctgccg
gaagagaccgagaagatcctgcgctggctcgagacgcccggcacccgcctggtcagcctc
gacggcgagtggacctgcccggtcaacggcgccggccgctcccgcgaccgcctcgagccg
ctggtgcgatcgcaggagcaggtggcggggttcgacgagccccgtggccgcacgctgcac
cgcccgcctggtgcggtggcctccggtgccgccgcggcgggctga
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