Barrientosiimonas endolithica: GCM100_15010
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Entry
GCM100_15010 CDS
T09132
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bei
Barrientosiimonas endolithica
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bei03016
]
GCM100_15010
Enzymes [BR:
bei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GCM100_15010
Transfer RNA biogenesis [BR:
bei03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GCM100_15010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BDZ57844
LinkDB
All DBs
Position
complement(1422231..1423271)
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AA seq
346 aa
AA seq
DB search
MDAERASGYRYGNRAYLVQLRRAGAGTWLIDPIAVPDLAPLQEAIGDTEWILHAATQDLP
CLAEVGMRPAALFDTELGGRLAGLPRVGLSAVVEHYLGLSLAKEHSAVDWSTRPLPEPWL
RYAALDVEVLAEVRDRLAADLAQQGKAELAAQEFDALTRFTGPPQRTDPWRRTSGMHRLR
DRRALARVRELWQTRDDIARERDLAPGRVLPDALIVQLAASDPRTGEDLTALSSSGGVSQ
RGRRRPAHRSLARYQRQWLEAVRRADQLPQAQLPPSALRSDAPPPPRAWADREPVAAARL
AVVRERLTEVSEQQQIPVENLLTPDSLRRVLWTPPDPADEGDSVPR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtggacgccgagcgggccagtgggtatcgctacggcaaccgcgcctatctcgtccagctg
cgccgcgccggcgccggcacgtggctgatcgacccgatcgccgtgccggacctggccccg
ttgcaggaggcgatcggcgacaccgagtggatcctgcacgccgccacccaggacctgccg
tgcctggccgaggtcggcatgcgcccggccgcgctgttcgacaccgagctgggcgggcgc
ctcgccgggctcccccgcgtggggctgtcggcggtcgtcgagcactacctggggctctcg
ctcgccaaggagcactcggcggtcgactggtcgacgcggccgctgcccgagccgtggctg
cgctacgccgcgctcgacgtcgaggtgctcgccgaggtgcgcgaccggctggccgccgac
ctcgcgcagcagggcaaggccgagctggccgcccaggagttcgacgcgctcacccggttc
accgggccgccgcagcgcaccgacccgtggcgccgcacgtcgggcatgcaccggctgcgc
gaccggcgcgcgctcgcgcgggtgcgcgagctgtggcagacgcgcgacgacatcgcccgc
gagcgtgacctcgcgcccgggcgggtgctgcccgacgcgctgatcgtgcagctggccgcg
agcgacccgcgcacgggcgaggacctcacggcgctgtcgtcgtcgggcggggtcagccag
cgcggtcgacgccggccggcgcaccggtcgctggcgaggtatcagcggcagtggctcgag
gccgtacgccgggccgaccagctcccgcaggcgcagctgccgccgtcggccctgcgcagc
gacgctcccccgccgccgcgcgcctgggccgaccgcgagccggtggccgccgcccgcctg
gccgtggtccgtgaacggctcaccgaggtgtccgagcagcaacagataccggtcgagaac
ctgctcacccccgacagcctgcggcgggtgctgtggacgcccccggaccccgccgacgag
ggggattccgtgccgcgctga
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