Barrientosiimonas endolithica: GCM100_17340
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Entry
GCM100_17340 CDS
T09132
Name
(GenBank) hypothetical protein
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
bei
Barrientosiimonas endolithica
Pathway
bei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCM100_17340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bei03400
]
GCM100_17340
Enzymes [BR:
bei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
GCM100_17340
DNA repair and recombination proteins [BR:
bei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM100_17340
RecFOR pathway proteins
GCM100_17340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
BDZ58077
LinkDB
All DBs
Position
complement(1628103..1628555)
Genome browser
AA seq
150 aa
AA seq
DB search
MVAVGVVRTPPGDDPAERLLSLQTEIDDWMHAHEPDAVAVERVFAKANIKGIMGTAQASA
VPMLAAARRGLPLALHTPSEVKAAVTGNGRADKAQVTSMVTRILRLQVAPRPADAADALA
LAICHVWRGGAHDRIAQAVAAQQARAGVRR
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcggtgggggtcgtgcgcacgccgccgggcgacgacccggccgagcggctgctc
agcctgcagaccgagatcgacgactggatgcacgcgcacgagcccgacgccgtggccgtc
gagcgggtcttcgccaaggccaacatcaaggggatcatgggcaccgcgcaggcctccgcc
gtcccgatgctcgcggccgcccgccgcgggctgccgctcgcgctgcacaccccgtccgag
gtcaaggcggccgtcaccggcaacggtcgcgccgacaaggcccaggtcacctcgatggtc
acccgcatcctgcgcctgcaggtcgccccgcgcccggccgacgccgccgacgcgctggcc
ctcgcgatctgtcacgtgtggcgcggcggcgcccacgaccgcatcgcccaggccgtggcg
gcccagcaggcgcgggcgggagtgcgccgatga
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