Barrientosiimonas endolithica: GCM100_21210
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Entry
GCM100_21210 CDS
T09132
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bei
Barrientosiimonas endolithica
Pathway
bei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCM100_21210 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bei03400
]
GCM100_21210 (recO)
DNA repair and recombination proteins [BR:
bei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GCM100_21210 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GCM100_21210 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
HPIP
Motif
Other DBs
NCBI-ProteinID:
BDZ58464
UniProt:
A0ABM8HBY5
LinkDB
All DBs
Position
complement(2021587..2022360)
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AA seq
257 aa
AA seq
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MALYRDAAIVLRTHKLGEADRIVTMLCRGTGKVRAVAKGVRRTKSKFGARLEPGMVVDLQ
CYQGRSLDTITQAAMLAPYGEQVAADYSAWTAAAAMLETADRLTEEREPVQRQFTLLAGG
LAALAAGRHDSGLVLDSYLLRAMATAGWAPSFRDCAGCGAPGPHRAVNLAAGGAVCPSCR
PPGSAAPRPETFVLLGALVAGDWATAVAADPRTRNEASGLVTAYLHWHLERGVRSLRLVD
RGTPALPAPPADRAGAR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccctctaccgtgacgccgcgatcgtgctgcgcacccacaagctgggtgaggcagac
cgcatcgtcacgatgctgtgccgcggcaccggcaaggtgcgcgccgtggccaagggcgtg
cgacgtacgaagtccaagttcggggcgcgcctcgagccgggcatggtcgtggatctgcag
tgctaccaagggcgttcgctcgacacgatcacccaggcggcgatgctcgcgccgtacggc
gagcaggtcgcggccgactactccgcgtggaccgcggccgcggcgatgctcgagacggcc
gaccggctcaccgaggagcgcgagccggtgcagcggcagttcacgctgctggcgggcggt
ctggcggcgctggccgccgggcgccacgactcggggctcgtgctcgactcctacctgctg
cgcgcgatggcgaccgccgggtgggccccgtcgttccgcgactgcgccggctgcggcgcg
cccggcccgcaccgggcggtcaacctcgcggcgggcggcgcggtctgcccgtcgtgccgg
ccgccgggctcggcggcgccgcgccccgagacgttcgtgctgctcggcgcgctggtcgcg
ggcgactgggcgacggccgtggccgcggacccgcgcacgcgcaacgaggccagcggactc
gtgacggcatacctgcactggcacctggagcggggcgtacgctcgctgcgcctggtcgac
cggggcacccccgctctgccggcaccgcccgccgaccgtgcaggagcccgatga
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