Barrientosiimonas endolithica: GCM100_22250
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Entry
GCM100_22250 CDS
T09132
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bei
Barrientosiimonas endolithica
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bei03016
]
GCM100_22250 (truB)
Enzymes [BR:
bei01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GCM100_22250 (truB)
Transfer RNA biogenesis [BR:
bei03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GCM100_22250 (truB)
Prokaryotic type
GCM100_22250 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
DUF2244
Motif
Other DBs
NCBI-ProteinID:
BDZ58568
UniProt:
A0ABN6YSR7
LinkDB
All DBs
Position
complement(2121589..2122536)
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AA seq
315 aa
AA seq
DB search
MTQAGQPATGQPTAGLLVVDKPAGWTSHDVVARGRRLARTRRVGHAGTLDPMATGVLVLG
VNQGTKLLTFLVGSDKTYTATVRLGQTTITDDAEGEVTATHDASGVTDEAIDAAVRDLTG
DIQQVPSAVSAIKIKGVRSYARVRSGEQVELPARPVTVHRFDVGDRRRTSVAGQAVVDLD
VEVEVSSGTYVRALARDLGAALGVGGHLTALRRTRVGGFGLDRAVPLTELEALVEGDEPL
PLVPLAEAAAAHLPVREVDADEADHLRHGRRLRSRTDGAARVAAVGPGGDLVAVIDESGP
TVRTHVVLPAALPAS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggccggtcagcccgcgaccggtcagcccacggccggtctgctcgtggtcgac
aagcccgccggctggaccagccacgacgtcgtcgcgcgcggtcggcgcctggcccgcacc
cgccgcgtcgggcacgcgggcacgctcgacccgatggcgacgggcgtgctcgtgctcggc
gtcaaccagggcaccaagctgctgaccttcctcgtcggcagcgacaagacctacaccgcc
accgtgcggctcgggcagaccacgatcaccgacgacgccgagggcgaggtcaccgcgacc
cacgacgcctccggcgtgaccgacgaggcgatcgacgccgccgtgcgcgacctcaccggc
gacatccagcaggtgccgagcgcggtcagcgcgatcaagatcaagggcgtgcgctcctac
gcccgcgtccggtccggcgagcaggtcgagctgccggcccgcccggtcacggtgcaccgg
ttcgacgtcggcgaccggcggcgtacgtccgtggccgggcaggccgtcgtcgacctcgac
gtggaggtcgaggtcagctcgggcacctacgtgcgcgcgctcgcccgcgacctcggcgcc
gccctcggcgtcggcggccacctcaccgccctgcgtcgcacccgggtgggcggtttcggt
ctcgaccgcgcggtcccgctcaccgagctggaggctctggtcgagggcgacgagccgctg
ccgctcgtgccgctcgcggaggccgcggcggcgcacctgccggtgcgcgaggtcgacgcc
gacgaggccgaccacctgcggcacggccggcggttgcgctcgcggaccgacggagccgcc
cgcgtcgcggccgtcggcccgggcggcgacctggtggccgtgatcgacgagagcgggccg
accgtgcgcacccacgtggtcctgccggccgccctgccggcgtcctga
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