Barrientosiimonas endolithica: GCM100_23510
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Entry
GCM100_23510 CDS
T09132
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bei
Barrientosiimonas endolithica
Pathway
bei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCM100_23510 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bei03400
]
GCM100_23510 (mutM)
Enzymes [BR:
bei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GCM100_23510 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GCM100_23510 (mutM)
DNA repair and recombination proteins [BR:
bei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GCM100_23510 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Col-Pyo_DNase
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BDZ58694
LinkDB
All DBs
Position
complement(2247175..2248041)
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVEVVRRGLADHVVGRRFDRVQVTGARVARRHLPGPLDLADRLTGRTVAAAERRG
KYLWLLLDDEQALIAHLGMSGQLLVEDADAPLEKHAHAVLDLDDGRQLRFVDQRTFGGLQ
LDELADVGPRRVPATIAHIAPDPLEAAYEPAAVVRRMKGRHTEVKRALLDQSLVSGIGNI
YADEALWRAQVHGARRTDLLTKPALARVLGHAREVMEAALDQGGTSFDALYVNVNGASGY
FERSLNAYGRVGEPCRRCGTLMRREVFMNRSSFFCPRCQPRPRRTAPR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggtggttcgccgcggcctcgccgaccacgtggtgggg
cgccggttcgaccgggtgcaggtcaccggggcgcgggtcgcgcgccgtcacctgcccggg
ccgctcgacctcgccgaccggctcaccggccgcacggtcgccgcggccgagcgccgcggc
aagtacctctggctgctgctcgacgacgagcaggcgctgatcgcccacctcggcatgagc
gggcagctgctggtcgaggacgccgacgcgcccctggagaagcacgcccacgcggtgctc
gacctcgacgacggacgccagctgcggttcgtcgaccagcgcaccttcggcgggctgcag
ctcgacgagctcgccgacgtcgggccgcgccgggtgccggccacgatcgcccacatcgcc
ccagacccgctggaggcggcctacgaaccggccgcggtcgtacggcggatgaagggcagg
cacaccgaggtcaagcgggcgctgctggaccagtcgctcgtctcgggcatcggcaacatc
tatgccgacgaggcgctgtggcgggcgcaggtgcacggcgcgcggcgcaccgacctgctg
accaagccggcgctggcgcgggtgctggggcacgcccgcgaggtgatggaggccgcgctc
gaccagggtgggacctcgttcgacgcgctctatgtcaacgtcaacggcgcgagcggctac
ttcgagcggtcgctgaacgcgtacggccgggtgggggagccgtgccgtcgctgcggcacg
ctgatgcgccgcgaggtgttcatgaaccgctcgagcttcttctgcccgcgctgccagccc
cgcccgcgccgcaccgccccgcgctga
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