Barrientosiimonas endolithica: GCM100_34530
Help
Entry
GCM100_34530 CDS
T09132
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bei
Barrientosiimonas endolithica
Pathway
bei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCM100_34530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bei03400
]
GCM100_34530
Enzymes [BR:
bei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GCM100_34530
DNA repair and recombination proteins [BR:
bei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM100_34530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
TraI_hel_assoc_N
PhoH
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
BDZ59796
LinkDB
All DBs
Position
complement(3295233..3296390)
Genome browser
AA seq
385 aa
AA seq
DB search
MSAADQARIEGLEALTMHRLLGWKPGSSNRFRHDRRNRLPHDVVVVDEASMVSLTLMARL
LEALRPATRLVVVGDPDQLASVDAGAVLADLVAGLRGRAGDEDAVEGAAGDEVEVEASGG
DGVRPGLGPPVVRLTHTYRFGGGIGDLAQAIRDGDADRALAVLADADDVDLVADPDDVRH
RLVRQAVDLRRRAAAGDGEGALRALAGHRLLCAHRTGPFGVSAWNRLVEQWVSEETGETF
WTPMYPGRPLLVTSNDYANDLLNGDTGVVIRSVDGVLRAELETTGGRRLLPTSRLSDIET
MHAMTVHKAQGSQAEHVTVLLPELDSPLLTRELLYTGVTRAQRHVTVVGTPEVLRAAIAR
RTHRASGLAQRLGAADGGGDTGVPA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggccgaccaggcccgcatcgagggcctcgaggcgctgacgatgcatcgcctg
ctgggctggaaaccgggcagcagcaaccgttttcggcacgaccggcgcaaccggctgccg
cacgacgtcgtggtcgtcgacgaggcctcgatggtgtcgctcacgctcatggcgcggctg
ctcgaggcgctgcgccccgccacccggctcgtcgtcgtcggtgaccccgaccagctcgcg
tcggtcgacgcgggggccgtgctcgccgacctggtggccggtctgcgcgggcgcgcgggc
gacgaggacgcggtcgagggtgccgcgggcgacgaggtcgaggtcgaggcgtcgggtggg
gacggcgtacgaccggggctggggccgcccgtcgtgcggctcacccacacctaccgcttc
ggcggcggcatcggcgacctcgcgcaggccatccgcgacggcgacgccgaccgcgccctc
gcggtgctggccgacgccgacgacgtcgacctggtcgccgaccccgacgacgtgcgccac
cgtctggtgcgccaggccgtcgacctgcgtcggcgggccgccgccggtgacggcgagggc
gcgctgcgggcgctggccggccaccggctgctgtgcgcccaccgcaccgggccgttcggc
gtctcggcgtggaaccggctcgtcgagcagtgggtgtcggaggagaccggcgagaccttc
tggacgccgatgtatcccggccgcccgctgctcgtcacgagcaacgactacgccaacgac
ctgctcaacggcgacaccggcgtcgtgatccgctcggtcgacggggtgctgcgcgccgag
ctcgagaccaccggcgggcgtcgcctgctgcccacgtcgcggctcagcgacatcgagacg
atgcacgcgatgacggtgcacaaggcgcagggcagccaggccgagcacgtcacggtgctg
ctgcccgagctcgactcgccgctgctcacccgcgagctgctctacaccggggtcacccgc
gcccagcggcacgtcacggtggtcggcacccccgaggtgctgcgcgccgccatcgcccgc
cgcacccaccgggcgagcgggctcgcccagcgcctgggtgcggccgacgggggaggcgac
accggcgtaccggcctga
DBGET
integrated database retrieval system
