Bradyrhizobium elkanii: BE61_08790
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Entry
BE61_08790 CDS
T07520
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bel
Bradyrhizobium elkanii
Pathway
bel02020
Two-component system
bel02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BE61_08790 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BE61_08790 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bel03021
]
BE61_08790 (rpoN)
Transcription machinery [BR:
bel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BE61_08790 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
BBB95460
LinkDB
All DBs
Position
919913..921568
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AA seq
551 aa
AA seq
DB search
MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLSAFVEEELERNPLLERAADGPEPPV
AGEPAMERPDYGDSDGSSSYGDDGDASDMAAGPGGEAAFEPGQEEWLNRDLGSRAEIEQT
LDTRLDNVFSEEPAEAAARAAQDAPPSVYTEWGGGASSDDEYNLEAFVAAELTLADHLAE
QLAVAFSAPAQRMIGQYLIDLVDDAGYLPADLGQAAERLGASQQAVDEVVAVLQKFDPPG
VCARNLSECLAIQLRELDRYDPAMQALVEHLDLLAKRDIAALRKLCGVDDEDITDMIAEI
RRLDPKPGLKFGTARTQTMVPDVYVRPGPDGGWHVELNSDTLPRVLVNQSYYAELSKTIR
KDGDKSYFTDCLQNATWLVRALDQRARTILKVATEIVRQQDGFFTYGVAHLRPLNLKAVA
DAIQMHESTVSRVTANKYMATNRGSFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDG
EAPSAILSDDTIVERLRASGIDIARRTVAKYREAMRIPSSVQRRRDKQSMLGNALSAPAS
SSDRSRDTAPV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgcaaagactagagttccgccagtcgcagtcgctggtgatgacgccgcag
ctgatgcaggcgatcaagctgctgcaactgtcgaacctggatctgtcggcctttgtcgag
gaagagctggagcgcaatccactgctggagcgggcggcagacggaccggagccgccggtg
gcgggcgagccggccatggagcggccggattacggcgattccgatggttccagcagctat
ggggacgatggcgacgcttccgacatggccgcaggcccaggcggcgaggccgccttcgag
cccggccaggaggaatggctgaaccgcgatctcggcagccgcgccgagatcgagcagacg
ctcgatacccgcctcgacaacgtgttttccgaggagccggcggaagcggcggcgcgcgcc
gctcaggatgcacctccgtcggtctacaccgaatggggcggcggcgcctccagcgacgac
gagtacaatctcgaagctttcgtggccgccgagctgacgcttgccgaccacctcgccgaa
caactcgcggtggcgttctcggcgccggcgcagcgcatgatcgggcagtatctgatcgac
ctggttgacgacgccggttacctgccggccgatctcggtcaggccgccgagcggctcggt
gcgtcgcagcaagcggtcgacgaggtcgtcgcggtgctgcagaaattcgacccgccgggc
gtgtgcgcgcgaaacctgagcgaatgcctcgcgatccagctgcgcgagctcgatcgctac
gatccggcgatgcaggcgctggtcgagcatctcgatctgctcgccaagcgcgacatcgcg
gccttgcgaaagctctgcggcgtcgacgacgaagacatcaccgacatgatcgccgagatc
cgccggctcgacccgaagcccggactgaagttcggcaccgcgcggacgcaaaccatggtg
cctgacgtctatgtgcgcccgggtcccgacggcggctggcatgtcgagctcaacagcgac
actctgccacgcgtgctggtcaaccagtcctattacgctgagctgtcgaagacgatccgc
aaggacggtgacaagtcgtacttcaccgactgcctgcagaatgcgacctggctggtccgc
gcgctcgatcagcgcgcccgcaccatcctgaaggtcgcgaccgaaatcgtccgccagcag
gatggcttcttcacttatggcgtcgcgcatttgcggccgctcaatctgaaggcggtcgcg
gatgcgatccagatgcatgaatcgacggtgtcgcgcgtcaccgccaacaaatacatggcg
accaatcgcggcagttttgaattgaagtattttttcaccgcctcgatcgcgtcggccgac
ggtggcgaggcgcattcggccgaagcggtgcgtcaccacatcaagcaattgatcgacggc
gaggcgccgtcggcaatcctgtccgacgacacgatcgtggaacgtttgcgcgcctcgggc
attgatatcgcccgccgcaccgtcgcgaagtaccgcgaggcgatgcggataccatcctcg
gtgcagcgacgccgtgacaaacagagcatgctcggtaatgccctttcggcccctgcctcc
tcatccgaccggtcgcgcgatacggcccccgtttag
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