Bradyrhizobium elkanii: BE61_09430
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Entry
BE61_09430 CDS
T07520
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bel
Bradyrhizobium elkanii
Pathway
bel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BE61_09430 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bel03019
]
BE61_09430 (pnpA)
03016 Transfer RNA biogenesis [BR:
bel03016
]
BE61_09430 (pnpA)
Enzymes [BR:
bel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BE61_09430 (pnpA)
Messenger RNA biogenesis [BR:
bel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BE61_09430 (pnpA)
Transfer RNA biogenesis [BR:
bel03016
]
Prokaryotic type
tRNA degradation factors
BE61_09430 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5813
Motif
Other DBs
NCBI-ProteinID:
BBB95523
LinkDB
All DBs
Position
complement(987944..990106)
Genome browser
AA seq
720 aa
AA seq
DB search
MFNTHSVEIDWGGRPLKLETGKIARQADGAVLATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH
DMENDPDIVSLVAASAALTLSGAPFKGPIGAARVGFANDEYVLNPTLDEMTETQLDLVVA
GTADAVLMVESEAKELNEDVMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTTIDNSE
IEKEMLGIAEQELRNAYAIPVKQERYAAVGAVKEKVLAHFFPEGQEPKYDKLRVAGVFKE
LEAKIVRWNILDTGKRIDGRDAKTVRNIIAEAGVLPRAHGSALFTRGETQAMVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTIRVVSEITESNGSSSMASVCGASLSLMDAGVPLKRPTAGIAMGLILEGQRFAVLS
DILGDEDHLGDMDFKVAGTDQGITSLQMDIKIEGITEEIMKVALGQAKEGRIHILGEMAK
ALTAARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
NDGEAMKAAIKWIKSIASDPEVGQIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAANRV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQTTGEDLEAKQKTEAPAAAPREAAGE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatacgcattccgtcgagatcgactggggtggacgtcccctcaaacttgaaacc
ggcaagatcgcccgccaggccgacggcgccgtgctggccacctacggcgagaccgtggtg
cttgccaccgtcgtcgcggcgaaggcaccgcgcgaaggcgtcgacttcctgccgctcacc
gtcgactaccaggagaagacctacgccgcgggccgcattcccggcggctatttcaagcgc
gaaggccgtccgaccgagaaggagacgctggtctcccgcctgatcgaccgcccgatccgt
ccgctgttcgtcgacggctggcgcaacgagacccaggtgatcgtcaccgtgctctcgcac
gacatggagaacgatccggacatcgtgtcgctggtcgccgcctccgccgccctgacgctg
tcgggcgcgccgttcaagggcccgatcggcgccgcgcgcgtcggcttcgccaatgacgaa
tacgtgctcaacccgacgctggacgagatgaccgagacccagctcgatctcgtcgtcgcc
ggcaccgccgacgccgtgctgatggtcgaatcggaagccaaggagctcaacgaagacgtg
atgctcggcgcggtcatgttcggccaccgccacttccagcccgtcatcaacgcgatcatc
gagctcgccgagaaggccgccaaggagccgcgcgaagtcaccacgatcgacaattcggag
atcgagaaggagatgctcggcatcgccgagcaggagctccgcaatgcctacgcgatcccg
gtcaagcaggaacgctatgccgcggtcggcgccgtcaaggagaaggtgctcgcgcacttc
ttcccggaaggccaggagccgaaatacgacaagctccgcgtcgccggcgtgttcaaggaa
ctggaagccaagatcgttcgctggaacatcctcgacaccggaaagcgcatcgacggccgc
gacgccaagaccgtgcgcaacatcatcgccgaagccggcgtgctgccgcgcgcccacggc
tcggcgctgttcacccgcggtgaaacccaggcgatggtcgtgaccacgctcggcaccggc
gaggacgagcagtacatcgatgcactgtcggggacctacaaggaaacgttcctgctgcac
tacaacttcccgccctactcggtcggcgagaccggtcgcctcggcggcaccaagcgccgc
gagatcggccacggcaagctcgcctggcgcgcgatccacccggtgctgccgccgcaccac
gagttcccgtacacgatccgcgtggtctccgagatcaccgagtcgaacggctcgtcctcg
atggcttcggtgtgcggcgcctcgctgtcgctgatggacgccggcgtgccgctgaagcgg
ccgaccgccggtatcgccatgggcctgatcctcgaaggtcagcgcttcgcggtgctgtcg
gacatcctcggtgacgaggatcatctcggcgacatggacttcaaggtcgccggcaccgac
cagggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaggagatcatg
aaggttgcgcttggccaggccaaggaagggcgcatccacatcctcggcgagatggccaag
gccctgaccgcggcgcgcgccgagctcggcgaatacgcaccgcgcatcgagaccttcaag
atcgccaccgacaagatccgcgaagtgatcggcaccggcggcaaggtcatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtgaaggtcgcatcc
aacgacggcgaggcgatgaaggctgcgatcaagtggatcaagtcgatcgcctccgatccg
gaggtcggccagatctacgagggcaccgtcgtcaaggtgatggagttcggcgcgttcgtg
aacttcttcggcgccaaggacggcctcgttcacatcagccagctcgcggccaaccgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgatcgcggcaagacccgcctgtcgatgaaagccgtcgaccagaccaccggcgaggac
ctcgaagccaagcagaagaccgaggcgccggctgcagcgccgcgcgaagctgccggcgag
taa
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