Blochmannia endosymbiont of Camponotus modoc: M9396_00865
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Entry
M9396_00865 CDS
T08359
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bem
Blochmannia endosymbiont of Camponotus modoc
Pathway
bem03030
DNA replication
bem03430
Mismatch repair
bem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9396_00865 (holA)
03430 Mismatch repair
M9396_00865 (holA)
03440 Homologous recombination
M9396_00865 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bem03032
]
M9396_00865 (holA)
03400 DNA repair and recombination proteins [BR:
bem03400
]
M9396_00865 (holA)
Enzymes [BR:
bem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9396_00865 (holA)
DNA replication proteins [BR:
bem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M9396_00865 (holA)
DNA repair and recombination proteins [BR:
bem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M9396_00865 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
Capsid_N
Motif
Other DBs
NCBI-ProteinID:
URJ26464
LinkDB
All DBs
Position
205375..206403
Genome browser
AA seq
342 aa
AA seq
DB search
MIWIYPEQLFIELKKELKSVYVLLGNDSYFLGDSYLNIVNTARMLNFNESVNIALDTYSD
WENIFNFFRVSSLFEKRRILSLKFPQNYPVAILKENVPLLFSFLHDDLVLILYIHESNQI
NKNNIWLQCFNKIGMFVDCSTPTHTRLIMWIENQAKNMKLVIENLSCQLLCYYYEGNLTL
LNQTLQNLSLIYPDGNLNFIRVKKIVTDSAFFNMNHWIESILTGNKQRADRILKKLEYIG
VDLELLLCKIRSEILMITNMKYNMVQGKSLFNLLKKYKIYSKYHCMLLSRAVNRLSLYQL
HQAIELLAQIELIYKKDYIVLSRSSFELLSLILCYDKKVALK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatttggatatacccagaacaattgtttatagaattgaaaaaagagttgaaatctgtt
tatgtattattagggaatgattcttattttttaggagatagttatctgaatattgttaat
acagccagaatgctaaatttcaatgaatctgttaatatagcattggatacgtattctgat
tgggagaatatatttaattttttcagggtatcaagtttatttgaaaaacgcagaatatta
tccctgaaatttcctcaaaattatcctgttgctattttaaaagaaaacgtacctttatta
ttctcatttcttcatgatgatttagtattaattttatatattcatgaatcaaatcaaatt
aataaaaataatatttggttacaatgttttaacaaaataggaatgttcgttgattgcagc
actcctacgcatacacgcttgataatgtggatagaaaatcaagctaaaaatatgaaactt
gttatagaaaatttatcttgtcaattattatgttattattacgaaggtaatttaacatta
ttaaatcaaacgttgcagaatttgtctttaatctatcctgatggaaatttaaattttatt
cgtgtaaaaaaaatagtaactgattcagcattttttaacatgaatcattggatagaatcg
attttaacaggcaacaaacaacgtgctgatcgtattctaaaaaaattggaatatataggt
gtcgatttagaactattattatgcaaaattagatctgaaatactgatgataactaatatg
aaatacaatatggtacaaggaaaatcattatttaatttgttaaaaaaatataaaatatat
agcaagtatcattgtatgttattatctagagccgttaatcgattaagtttataccaatta
catcaagcaatagaattgttagcgcaaatagaattaatatataaaaaggattatattgtt
ttgtcacgatcaagttttgaactattatcactcatattatgttacgataaaaaggttgcg
cttaaataa
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