Blochmannia endosymbiont of Camponotus modoc: M9396_00995
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Entry
M9396_00995 CDS
T08359
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bem
Blochmannia endosymbiont of Camponotus modoc
Pathway
bem03030
DNA replication
bem03430
Mismatch repair
bem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9396_00995 (dnaE)
03430 Mismatch repair
M9396_00995 (dnaE)
03440 Homologous recombination
M9396_00995 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bem03032
]
M9396_00995 (dnaE)
03400 DNA repair and recombination proteins [BR:
bem03400
]
M9396_00995 (dnaE)
Enzymes [BR:
bem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9396_00995 (dnaE)
DNA replication proteins [BR:
bem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M9396_00995 (dnaE)
DNA repair and recombination proteins [BR:
bem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M9396_00995 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
DUF223
Motif
Other DBs
NCBI-ProteinID:
URJ26487
LinkDB
All DBs
Position
complement(240872..244363)
Genome browser
AA seq
1163 aa
AA seq
DB search
MIKPRFIHLHVHSDYSMIDGLATVNKLITKAAYLKMPALALTDFNNLFGFIKFYDVAYKS
GIKPIIGADFLVQDLIIGNKPSELTCLVTDKQGYYHLIMLISKAYKNKCNNIALMIQRHW
LTEYNKGLILLSGGRNGDIGRYLLRNEKLKIEQCLYFYSKYFPNRYYLELIRTGRQHEES
YLQLAIELSIAKGLPVVATNDVRFINEKDFLAHEVRVAIYDGTTLNNIQQLRKYSSQQFM
KSEQEMCELFSDIPESLVNSVEIAYRCNLTIDLGGYFLPQFPTGRRSAKDFLTTHAKKGL
EERLILLFPKTEERLVKRKPYDLRLKHELQVINNMNFPSYFLIVMEFIKWAKNNDIPVGP
GRGSGASSLVAYVLKITELDPLQFDLLFERFLNPERISMPDLDIDFCMDHRDLVIEHVSK
TYGSDAVSQIITFGTMAAKAVIRDVGRVLGHPYALINRIAKLIPLESGITLKKAFSIEPQ
LKLLYENDEDITELIDMALQLEGIVRNVSKHAGGVVIAPIKITDFSPLYYDNDSIHPMTQ
FDKDDIERIGLIKFDFLGLRTLTIINHALKMINNTRLKHGLTIIDIHSISLYDQKSFHIL
QSSETTAIFQLESRGIKELIKRLKPDCFEDLIALIALFRPGPLQSGMVDNFINRKHGYET
ISYPDAKWQHESLRPVLESTYGIILYQEQVMQIAQVLAGYTLGQADILRRAIGKKKPEDM
AKQRSFFNLGAAKNGIDSTLSMKIFDLVEKFAGYGFNKSHSAAYALISYQTLWLKTHYPS
EFMAAALSSDMDNLNKVVYLIGECQKMKLIISPPNINTSQYHFYVNANKEIVYGFGAIKG
IGKTSIESIITSRNKGGSFKELFDFCIRIDSTKINHRMIEKLILSGACDSFGIHRSKLMS
SLNDVLKRANQHIKNKYSKQTDIFEMCLDESNTIAISDRNDNAPQWSNQLLLEKEKEALG
LYLTSHPTIQYIKTIKRCAPNIVKIKDVILETDNKILHIFGLIISIRTKLSKRGKRVVFF
ILEDYSGRLEIMIFETLIHKYQHCLKENNLLLVTGVINIDKIHGHYKMIARKLEDINDIH
KKHTRSLSITLKNKQVDNKLLTNIHFFLEKNKLGTLPVYFFYQKNGIQIKLHCGKKWYIT
LTDQLLTNLRSLVGDEQIKLELH
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaccacgttttattcacttgcacgtacatagcgattactccatgattgatgga
ttagctacggtaaataaattaataacaaaagcggcatatcttaaaatgcccgcgttagct
cttactgattttaacaatttatttgggtttattaaattctatgatgttgcttataaatca
ggaatcaagccaattattggagcagattttttagtacaagatctcatcattggcaacaaa
cccagcgaattaacatgcttggttactgataaacagggttattatcatttaattatgcta
atttcaaaagcatataaaaataaatgtaataatattgctcttatgattcaacgccattgg
ctcacagaatataacaaaggtttaattctactttctggagggcgcaatggagatatcgga
agatatttattaagaaatgaaaaattaaagatagaacaatgtttatatttttattccaag
tattttccaaatagatattatttggaactaatacgtactggtcgtcaacatgaagaatct
tatttacaattagcaatagaattatcaatagccaaaggattaccggtagtagctaccaac
gatgtacgtttcattaatgaaaaagattttttagcgcatgaggttcgcgtagcgatatat
gatggtactacattaaataatattcaacaattacgcaaatatagttcacaacaatttatg
aaaagtgaacaagaaatgtgtgaattattttccgatataccagaatctttagtaaatagt
gtagaaattgcttacagatgtaatctcaccatcgatttaggcggatattttttaccacaa
tttcctactgggcgtaggtctgctaaagattttcttactacacacgcaaaaaaaggattg
gaagaacgcttaattttgttatttccaaagactgaagaacgtcttgttaagcgaaaaccg
tatgatttacgattgaaacatgaattacaagtaattaataatatgaattttcctagttat
tttctaatcgttatggaatttatcaaatgggctaaaaataacgatattccagttggtccg
ggaagaggttctggcgctagttcactagtagcttatgttttaaaaattacagaacttgat
ccattacaattcgatttactgtttgaacgttttcttaatccagagcgtatatcaatgcct
gatctagatattgatttttgcatggatcatcgtgatttagtaattgaacatgtctctaaa
acttacggatcggatgctgtatctcaaattattacgtttggaactatggcagctaaagca
gtgattcgagatgtagggcgtgtactagggcatccttatgcgttgattaatcgtatcgct
aaattaattccattagaatcgggaataacgttgaaaaaagcgttctctatcgaacctcaa
cttaaattactttatgaaaacgacgaagatattacagagctcatcgatatggccctgcaa
ttagaaggtatcgtaagaaatgtaagcaaacatgcaggaggagtagtaattgcgcctata
aaaattaccgatttttctcccttgtattatgataacgacagtattcatccaatgactcaa
tttgataaagatgacattgaacgtattggtttaataaaatttgattttcttggtttgcgt
acattgactattattaatcatgcattaaaaatgattaacaatacacgcctgaaacatggt
ctcactattattgatatacactccatatcgttatacgaccaaaaaagctttcatatactt
caatcttcagaaactactgcaatatttcaattagaatcacgcggcataaaggaattaatt
aaacgtttaaaaccagattgttttgaagatttgatagcattgattgcgttatttcgtcca
ggaccgctacagtcaggtatggtagataatttcatcaatagaaaacacggttatgaaact
atttcttatcctgatgctaaatggcagcatgaatctctacgtccagtattggaatcaact
tatggaattattttgtatcaagaacaagttatgcaaatagcacaagtacttgcaggttat
acacttggacaagccgatatattaagacgtgctatcggcaaaaaaaaaccagaagatatg
gctaaacaacgctctttttttaatttaggtgcggcaaaaaatggtatcgatagtacacta
tcaatgaagatttttgatcttgtagaaaaattcgccggttatggtttcaataaatctcat
tctgcagcatatgcgttaatatcttatcaaacattatggttaaaaacacattatccttct
gaatttatggcggcagcattaagttctgatatggataatttaaataaagtagtatactta
ataggtgaatgtcaaaaaatgaaacttataatttcacccccaaatattaacactagtcaa
tatcatttttatgttaatgcaaataaagaaattgtttatggatttggagctattaaagga
ataggaaaaacctctatagaatctataataacatctcgtaataaaggtggtagttttaaa
gaattatttgacttctgtattcgtatcgatagtacaaaaataaatcatcgtatgattgaa
aaattaattctttccggagcctgtgattcgtttggaatacatcgttcaaaattaatgtca
tcacttaatgatgtactaaaacgtgctaatcaacatattaaaaataaatatagcaaacaa
acagatatatttgaaatgtgtttagatgaatctaatactattgcgatatctgatcgcaat
gacaacgcaccacaatggtctaatcagttattattagaaaaagaaaaagaagctcttgga
ttatatttaaccagtcatcctactattcaatatataaaaacaataaaacgttgcgcaccg
aacatcgttaagataaaagatgttatactagaaacagataataaaatactgcatattttt
ggtttaattatatcaattcgaacaaaattaagtaagagaggaaaacgtgttgtatttttt
attctagaagattattctggtcgattagaaataatgatattcgaaacactgattcataaa
tatcaacattgtttaaaagaaaataatttattgcttgttacaggcgtgatcaatattgat
aagatacatggtcattacaaaatgattgcacggaaattagaagatattaacgacattcat
aaaaaacatacacgtagtttatctatcacattaaagaacaaacaagttgacaataaatta
ttgaccaacattcatttttttttagaaaaaaataaacttggaactttaccagtatatttt
ttttatcaaaaaaatggcattcaaattaaattacattgtggaaaaaaatggtatattacc
ctgactgatcagttactaactaatttacgtagtcttgttggggatgaacaaatcaaatta
gaattacattaa
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