Blochmannia endosymbiont of Camponotus modoc: M9396_01090
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Entry
M9396_01090 CDS
T08359
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bem
Blochmannia endosymbiont of Camponotus modoc
Pathway
bem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M9396_01090 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bem03400
]
M9396_01090 (recD)
Enzymes [BR:
bem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M9396_01090 (recD)
DNA repair and recombination proteins [BR:
bem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M9396_01090 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
UvrD-helicase
AAA_11
SH3_13
AAA_22
SLFN-g3_helicase
nSTAND3
UvrD_C
ResIII
DEAD
AAA_7
Mg_chelatase
PIF1
AAA
AAA_29
AAA_16
NTPase_1
FtsK_SpoIIIE
AAA_28
T2SSE
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
URJ26506
LinkDB
All DBs
Position
265787..267694
Genome browser
AA seq
635 aa
AA seq
DB search
MKNIINNILKLGLWHSLDVQFADVLALPIYDGNRHNNIKEALMLASATLSSNVRAGHVCL
PLWFLTPDKLFQGNYPELTYAIYRKLGKLSISDWQELLLSCPAVSDGSRVTPLILENKRL
YLHHMWQDECIVAQFFNHKYPSNVFQKEKIIHVLNQLFPITYTEVDWHKIATAIGVTHHR
VLISGGPGTGKTSIIAKIVAALLLCSKNHNLNIQITAPTGKAAALLTESFKTTMHNIPQL
ENLLLCNLPEKATTLHSLLRTRLYKENIQYNCFDLTRLDLLIIDEASMVSLSMLAQLILT
LSPQTKVIFFGDQYQLCSVEPGSVFKDVCQFSNFYYSRKRYQELIDLTGYILPIISPSES
SVHYNYNSIIDGTCILKKNYRFSESSGINKLSGAINSGDYNHVLSLLNSNIYKDLYYIYF
VDKKSYITMILNCAMAYSNYLQKLKHTQILTKNILKIFNHYRILCALRDGPFGVIRINYY
IEQILNEKGLIQLNNSRNYIGRPIIILRNKPALELYNGDVGVLLLNDQNKLSAYFILPRG
GIKVIQIYQLPEHETCFAMTIHKAQGSEFQHIAIILPNKYTPLLTRELFYTAVTRARQCL
YLYATDHVIIRSVNSITQRYSGLYEKIKNHIIPMV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatattattaacaatattttaaaattagggttgtggcattcactagatgtacaa
tttgccgatgtattagctcttcccatttatgatgggaatcgacataataatataaaggaa
gcattaatgttagctagcgcaactctaagctctaacgttagggctggtcatgtttgttta
cctttatggtttcttactcctgataaattatttcaaggaaattatcctgaattaacgtat
gcgatatatagaaaattggggaaattatcgatatctgactggcaggaattattgctttct
tgtcctgcggttagtgatggatcacgggtcaccccattaatattggaaaataagcgtttg
tacttacatcacatgtggcaagatgaatgcatagtcgcgcaattttttaatcataaatat
ccatcaaatgtttttcaaaaagaaaaaataattcatgtattaaatcaattatttcctata
acttatacagaagttgattggcataaaatagctactgctattggcgtaacgcatcacaga
gtgttaatttctggaggacctggaactggaaaaacatctattatagcgaagatagtagct
gcattattgttatgcagcaagaatcataatctaaatattcagataaccgctccaacagga
aaagcagcagctcttttgactgaatcctttaaaacaacaatgcacaatattccacaatta
gaaaatcttctcttatgtaacttaccagaaaaagctactactctacatagtttacttaga
acacgattatataaagaaaatattcaatataattgctttgatctcacacgcttagatctt
ttaattattgatgaagcttctatggttagtctatctatgttagctcagcttattttgaca
ctttctccccaaacgaaagttattttttttggtgatcaatatcaattatgttcagtagaa
cctggatccgtatttaaagatgtgtgtcaattttctaatttttattattctcgtaaacgt
tatcaagaacttatagatcttacaggttacatattgcctattatatctccttctgaatca
tctgtgcattataattataatagtattattgatggtacatgtatactaaagaaaaattat
cgatttagtgaaagttcaggaattaataaattatctggtgctataaattcaggagattat
aatcatgtattgtcattgttaaattcaaacatatacaaggatttatattatatttatttt
gtagacaaaaaaagctatataactatgattcttaattgtgcaatggcatattctaactat
ttacaaaaattgaaacacactcaaatcctaacaaaaaatattttaaagattttcaatcat
tatcgcatattgtgtgcattgcgtgatggtccgttcggagtaataaggattaattattat
attgaacaaatattaaatgagaaaggattaattcaattaaataattctaggaattatata
ggtagacctattattatattacgtaataaaccagcattagaattatataatggagatgtt
ggggtattgttgttaaatgatcaaaataaattatctgcatattttattttaccacgagga
ggtataaaagttatacaaatatatcaattaccggagcatgaaacttgttttgctatgact
atacataaagcgcaaggatctgaatttcaacatatcgcaataatattacccaataaatat
acaccattattaacacgagaattattctatactgccgtcactagagctcgtcaatgtctt
tatttatacgcgacagatcacgtaataatacgcagtgttaattcgatcacacaacgttat
agtggattatatgaaaaaataaaaaatcatataattcccatggtttaa
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