Blochmannia endosymbiont of Camponotus modoc: M9396_01905
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Entry
M9396_01905 CDS
T08359
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bem
Blochmannia endosymbiont of Camponotus modoc
Pathway
bem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9396_01905 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bem03019
]
M9396_01905 (pnp)
03016 Transfer RNA biogenesis [BR:
bem03016
]
M9396_01905 (pnp)
Enzymes [BR:
bem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M9396_01905 (pnp)
Messenger RNA biogenesis [BR:
bem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M9396_01905 (pnp)
Transfer RNA biogenesis [BR:
bem03016
]
Prokaryotic type
tRNA degradation factors
M9396_01905 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
Ribosomal_L6
KH_2
SLS1_KH2
Staphostatin_B
Motif
Other DBs
NCBI-ProteinID:
URJ26093
LinkDB
All DBs
Position
complement(451985..454084)
Genome browser
AA seq
699 aa
AA seq
DB search
MLDPIIHKFKYGQHTVILDIGTIARQANAAVMASMSDTTVLVTVVSSNQVRLEQDFFPLV
VNYQERTYAAGKFPGGFFRREGRPSENETLTSRLIDRPIRPLFPKGFINDVQVVATVVSV
NPQVNPDIVAIIGVSAALSLSDIPFFGPIGAARVGYIKNQYVLNPTTTELSNSKLDLVIS
GTESNILMVESESCLLSEKEILDAIIFGHEQQQIVIHNINKLVKKVGKTKYSWNEKEVNI
SLKTYLSELYESRLQDTYCFFDKKERHTQVDGIKKDIVKTVLSSYQHSAVDEKEIMYLLN
YLEAQSIRYRILTNKLRVDGRSQDTIRKIDIKTGILPRTHGSALFTRGDTQALVVVTLGT
ERDAQNIDGLTGIRADRFLLHYNFPPYCVGEIGVIGAPKRREIGHGRLAKRGMLAVMPNA
NEFPYTIRVVSEITESNGSSSMASICGTSLALMDAGVPIKAAVAGVAMGLIKEGNDFVVL
SDIVSDEDHIGDMDFKVSGSRQGITALQMDIKTDGITYDIINIALQKAKNARLQILDIME
QIIKFPNQEISKFAPRIYSIKVNPDKIKDVIGKGGSVIRSLTEETNTIIDIEDNGIIKIV
ALDYDKAKQAIRRINDITANIEIGAIYTGKVSHIVEFGAFVTILSGKEGLVHISQISERR
INKVTDYLKLGQEVLVKVLEIDRQGRIRLSMKGVHQVSA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatccgattattcataaatttaaatatggacagcatactgtaattttagacatt
ggaacaatagctcgtcaagcaaatgctgcagtcatggcgagtatgagtgatactacagta
ttagttacagtagttagttctaatcaagtaagattagaacaagatttttttcctcttgtt
gtaaattatcaagagcgcacttatgctgctggaaaatttccaggaggtttttttcgtcga
gaaggtcgaccaagtgaaaacgaaacgttaacgtctcgcttgattgatcgccctattcgg
ccgttattccctaagggatttattaatgatgtacaagtagttgctacggtagtatcagta
aatcctcaagtaaatccagatattgtagcaataataggagtatccgcggcattgagtttg
tctgatattccattttttggacccattggggcagctagagttggttatattaaaaatcaa
tatgtattaaatccaacaacgacggaattatctaatagtaagttagatttggtgatttca
gggactgaatccaatattttgatggtggaatcagaatcgtgtttactaagtgaaaaagaa
attttagacgctattatatttggtcatgaacaacaacaaatagtgattcataatattaat
aaattagttaaaaaagttggaaaaactaagtattcttggaacgaaaaggaagttaatata
tctttaaaaacgtatttatctgaattgtatgagtctcgtttgcaagatacatattgtttt
tttgataagaaggagcgtcatactcaagttgatggcattaagaaagatatagtaaaaacc
gttcttagtagctaccagcattccgctgtagatgaaaaagaaataatgtatcttttaaat
tacttagaagcgcaatcaattcgttatcgtattttaacgaacaaattacgtgttgatgga
cgttcgcaagatacaattcggaaaatagatataaaaacaggcatattaccacgtactcat
ggatcagcattatttactagaggcgatactcaagcgctggttgttgttacgcttggcaca
gaacgcgatgcacagaatattgatggattaactggtattcgtgcggatagatttttatta
cactataattttccaccatattgtgtgggtgaaataggtgtcataggagctccaaaaaga
agagaaataggacatggacgtttagccaaacgaggtatgttagcagttatgcctaatgct
aatgagtttccgtatacaatacgtgtagtgtcagaaatcactgaatctaatggatcgtcc
tctatggcatctatttgtggtacatcgttagcgttgatggatgctggagtgccgattaaa
gcagcagttgctggtgttgctatgggtttgattaaggaaggaaacgattttgtggtatta
tctgatattgttagcgatgaagatcatattggagatatggattttaaagtatctggtagt
cgtcaaggtatcacggcattgcaaatggatattaaaacggatgggattacttatgatata
ataaatattgcgctacaaaaagcaaaaaatgctcgactgcaaatattagatattatggaa
cagattattaagtttcctaatcaggaaatttctaaatttgctcccaggatatatagcatt
aaagttaatccagataaaattaaagatgttataggaaaaggaggatcagttattcgctca
ttgactgaagaaactaatactattattgatattgaagataatggcatcataaaaatagtt
gctttagattatgacaaagcaaaacaagctattcgtagaattaacgatatcactgcaaac
attgaaataggagccatttatactggaaaagttagtcacattgtggaatttggagcattt
gttactatcctttctggaaaagaaggattagttcacatttcccagatttctgaaagaaga
ataaataaagtaactgattatttgaaattaggacaagaagtactagtaaaagtgttagaa
atagatcgtcagggacgaattcgattgagtatgaaaggggtacatcaagtgagcgcatag
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