Blochmannia endosymbiont of Camponotus modoc: M9396_02485
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Entry
M9396_02485 CDS
T08359
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bem
Blochmannia endosymbiont of Camponotus modoc
Brite
KEGG Orthology (KO) [BR:
bem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bem03021
]
M9396_02485 (rpoH)
Transcription machinery [BR:
bem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M9396_02485 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UPF0231
Motif
Other DBs
NCBI-ProteinID:
URJ26191
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Position
590860..591705
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AA seq
281 aa
AA seq
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MPKYIQKNVTLIPPGNLEAYIRVANAYAMLTAEEEKRLAKRLYYNGDLDAAKKLIVSHLR
FVVHVSRNYSGYGLPQADLIQEGNIGLMKAVRRFNPELDVRLVSFAVHWIKSEIHEYVLK
NWRIVKIATTKAQRKLFFNLRKTKQRLGWFNAGEIEIVAKALNVTSKDVREMESRMSAQD
MTFEQSSDEDNRGISIAPILYLQDKIVSSNEEEWIDQVSDKLNAAIKTLDKRSQHIIRAR
WLNVDNKSTLQELANQYGVSAERVRQLEKNAMKKMKLIIQN
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatatatacaaaaaaatgtaaccttaattcctccagggaacttagaagcttat
ataagagtagccaatgcttatgctatgttaacagcagaagaagaaaaaaggttagctaaa
cgcttatactataatggtgatttagatgctgcaaaaaaactcattgtatcacatttaaga
tttgttgttcatgtttctcgtaattattctggttatggattacctcaggccgatttaata
caagaaggtaatattggtttaatgaaggctgttcgtcgatttaatccagaattagatgtt
cgtttagtatcatttgctgtacactggattaaatccgaaattcatgaatatgttttaaaa
aattggcgcattgtaaaaatagctactactaaagcacagcgtaaattattttttaatcta
cgtaaaactaaacaacgtttaggttggtttaatgcgggagaaatagaaatagtcgcaaag
gcgctaaatgtgactagcaaagatgtgcgcgaaatggaatccagaatgtcagcacaagat
atgacttttgaacaatcttcagatgaagataaccgaggaatatcaatagcacctatttta
tatttacaagacaaaattgtttcctctaatgaagaagaatggatcgatcaagttagtgat
aaattaaatgcagctataaagactttagacaaacgcagtcaacatattattcgtgcccga
tggttaaatgtagataataaaagtacgttacaagaattagccaatcaatacggtgtgtct
gctgaacgagtacgtcaattagaaaaaaatgctatgaaaaaaatgaaactaattatacaa
aattaa
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