Blochmannia endosymbiont of Camponotus modoc: M9396_02525
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Entry
M9396_02525 CDS
T08359
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bem
Blochmannia endosymbiont of Camponotus modoc
Pathway
bem03030
DNA replication
bem03410
Base excision repair
bem03420
Nucleotide excision repair
bem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9396_02525 (polA)
03410 Base excision repair
M9396_02525 (polA)
03420 Nucleotide excision repair
M9396_02525 (polA)
03440 Homologous recombination
M9396_02525 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bem03032
]
M9396_02525 (polA)
03400 DNA repair and recombination proteins [BR:
bem03400
]
M9396_02525 (polA)
Enzymes [BR:
bem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9396_02525 (polA)
DNA replication proteins [BR:
bem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M9396_02525 (polA)
DNA repair and recombination proteins [BR:
bem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M9396_02525 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M9396_02525 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
URJ26197
LinkDB
All DBs
Position
603363..606173
Genome browser
AA seq
936 aa
AA seq
DB search
MITIINNPIILVDGSCYIHRAYHAFPELITSDGKPVWVIYGVINMIKSLLIRYQPTHMVV
VFDAMGKTFRNNLFEKYKANRMKTPKNLYTQIDPLCEIIQAMGLPILKVPDVEADDVIGT
LAISCARSGNSVLISTGDKDMAQIVSSQITLINTMSNIIFTPKEVEKQFGVPPTLIADYL
ALIGDRSDNIPGVPGIGKKTAQILLNKIGNLKALYDHLDKISLLNLDLRGARAIQNTLQA
NKEVAFLSYKLTTIKTDVSLNISDYQLLIQQININTLQLLFTQYEFKNWLTDLQSGTWLD
KYHHLKHVPSHRRLNNTLLFQKNNLLSDYSKEKKIIKIIHNVEMLCHWIEKIDESKFFIF
SIYTDVFNVSTANIISICLSIDAKESAYIPIKTDSVNNHQNFLYLEEILSILQPTLENEK
IKKVGQNLKFSYSVLKRYNINLAGMACDVILELYVLYGTANYHDIKNFLDKDTFNAVTNF
KKNYDNYNENNIISDLQNIQLQSLHAAQFIKSLFNLHHTLWPKIEANNKLKKIFEEVEMP
LISILSRIESYGVLIDKKLLNTHAVELDYRLHALELEAYQLVGTPFNLASTKQLQEILYN
QQKLPILKKTPKGAPSTNEEVLKKLSKKYSMPKIILQYRALSKLQSTYINKLIAMINKKS
NRVHTSYNQTRTSTGRLSSTSPNLQNIPNRNYDGRKIRQAFIAPKNFLIVAADYSQIELR
IMAHLSQDIELINDFLSEKDIHTATASEIFVTALHSVTDEQRQRAKTINFGLIYGMSAFG
LARQLSVTCKEAQKYVDRYFNRYPGVMKYMQHIREHANKYGYVSTLDGRKLYLPDIYSAN
ILQKKGAERAAINAPMQGSAADIIKKAMISIDNWLQKDEIPARIIMQVHDELVFEVHNDI
VDPVVKKIKKLMEECFIMDVPLKVDVGIGKNWEQAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgattacaattataaataatccgataattttagtggatggatcttgttatatacaccgt
gcgtatcatgcgtttccagaattaatcactagcgacggaaaaccggtgtgggtaatatat
ggagtaatcaatatgattaaaagtctattgatacgatatcaacctactcacatggtggtt
gtttttgatgcaatgggaaaaacctttcgtaacaatttatttgaaaaatataaagctaat
cgcatgaaaacccccaagaatttatatactcaaattgatccattatgtgaaataatacaa
gccatggggttaccaattcttaaggtgcctgacgtagaagcagatgatgtgataggtaca
ttagctatatcttgtgcgcgatcaggaaattctgtgttaattagtacgggagataaggat
atggctcaaatagtatcatctcaaataactcttattaatactatgtcgaatattattttt
actcctaaagaagtagaaaaacagtttggagtaccaccaactctaatagctgattattta
gcattaataggagatcgttctgataacattcctggagtgcctggaataggaaaaaaaact
gctcagattttattaaataaaataggtaatttaaaagcattatatgatcatttagataaa
attagtctattaaatttagatttacgcggcgctagagcaatacaaaacacattacaagcc
aacaaagaagtagcatttctttcttataaactgacgactattaaaacagatgtatcttta
aatatatccgattatcaactgttaatacaacagataaatattaacactttgcaattgtta
tttacacagtatgaatttaaaaattggttaacagatttacagtcaggaacatggctggat
aaatatcaccatttgaaacatgtaccatcacaccgacggttaaataatacgcttttgttt
caaaaaaataatttattatcagattattccaaagaaaaaaaaattatcaaaataatacat
aatgttgaaatgctttgtcattggattgaaaaaattgacgaatccaaattttttatattt
agtatatatacagatgtatttaatgtttctacagccaatatcataagtatatgtttatct
atagatgctaaagaaagtgcgtatattcctataaaaactgattcagttaataatcatcag
aattttttatatcttgaagagatattatcaattttgcaaccaactttagaaaatgaaaaa
ataaaaaaagtaggccaaaatttaaaatttagttattctgtcttaaagcgttataatata
aacttagctggcatggcctgtgatgttatattagaattatatgtactgtatggtaccgct
aattatcatgatattaaaaattttttagataaagacacatttaacgctgttacgaatttt
aaaaaaaattatgataattataatgaaaataatataatttcagacctacaaaatatacaa
ttacaatctctacatgctgctcaatttattaaatccctgttcaatctgcatcatacttta
tggccaaagatagaagcaaataataaactaaaaaaaatatttgaagaagtagaaatgcct
ctaatatctatcctatcacgcattgaaagctatggcgtattaattgataaaaaactactt
aatacacatgcggtagaattagattatcggcttcatgcattagagctagaagcgtatcaa
ttagtaggcactccttttaatcttgcttcaactaaacaattacaagaaatattatataat
cagcaaaaattgccaattttaaaaaaaactcctaaaggggctccttcaactaatgaagag
gtattgaaaaaattgtcaaaaaaatattcaatgccaaaaatcattttgcagtatcgtgct
ttatctaaattacaatctacttatatcaacaaattaatcgctatgattaataaaaaatca
aatagggtgcacacctcatataatcaaactagaacttctacaggacgtctttcttctact
agtcctaatttgcaaaatattccaaatagaaattacgatggaaggaaaatacgtcaggct
tttattgctcccaaaaattttttaattgtagcggctgattattcccaaatagaattaaga
attatggcgcatctttctcaagatatcgaattaatcaatgattttctttctgaaaaagat
attcatactgcaacagcttctgaaatctttgttactgcactacactcggttactgatgaa
caaagacaacgagctaaaactattaattttggattaatttatggaatgagcgcatttgga
ttagcgcgtcaattatcagtaacatgtaaggaagctcaaaaatatgtagatcgttatttt
aatcgttatcctggtgttatgaaatatatgcaacatattcgagagcatgctaataaatat
ggttatgtatctacactagacggacgaaagttatatttaccagatatttactctgctaat
attcttcaaaaaaaaggcgctgaaagagcagcgattaatgctcctatgcaagggagcgct
gctgacattattaagaaagcaatgatatctattgataattggttacaaaaagatgaaatt
ccagcgcgtatcattatgcaagtacatgacgaattagtatttgaagtacacaatgatatt
gtagaccctgttgtaaaaaaaattaaaaaattaatggaagaatgttttattatggatgta
ccactaaaagtagatgttggtattggaaagaattgggagcaagcacactaa
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