Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus 757: BOBLI757_109
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Entry
BOBLI757_109 CDS
T03906
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ben
Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus 757
Pathway
ben03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOBLI757_109 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ben03019
]
BOBLI757_109 (pnp)
03016 Transfer RNA biogenesis [BR:
ben03016
]
BOBLI757_109 (pnp)
Enzymes [BR:
ben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BOBLI757_109 (pnp)
Messenger RNA biogenesis [BR:
ben03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BOBLI757_109 (pnp)
Transfer RNA biogenesis [BR:
ben03016
]
Prokaryotic type
tRNA degradation factors
BOBLI757_109 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
AKC60285
UniProt:
A0A0E3Y8X6
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All DBs
Position
126424..128511
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AA seq
695 aa
AA seq
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MLNSFVRKFSYGEHTVVLESGLIARQSNAAVMASMGDTTVLVTVVGVPDIKTEQDFFPLF
VSYQERTYAAGRFPGGFFRREGRPNETEILTSRLIDRPIRPLFPEGFLHEVQVIATVISV
NPQINPDIVAIIGVSAALSISDIPFNGPIGVARVGYIKGQYILNPTMDQLIDSRLDLVIA
GTESAILMVESEADVLSESEMLNAVIFGHEQQQIVIKNIKEFANEIGQSKWALRSLETSV
ILQDHIIDLAKSRFCDAYRLFDKSIRCARIDYIKNDIISLLSDNNNAKMDVNLIKNVLNG
LEKQIVRHRILQGELRIDGRSKDAVRNLDIRTGILPRTHGSALFTRGDTQALVTATLGTE
RNAQNIDELIGERTDRFLLHYNFPPYCVGEVGLVGSPKRREIGHGRLAKRGILAVMPKIH
EFPYTVRVVSEITESNGSSSMASICGASLALMDAGVPIKSAVSGIAMGLVKEGSNFVVLS
DIVGYEDYIGDMDFKVAGSRQGITALQMDIKIEGVTREIIYEALRQAKCGRLSILDTMEK
VIRAPRCDISEFAPRIHTIKINPGKIKDLIGKGGSVIRALTEATGTNIEIEDSGIIKVSS
VDKEKSCNAIRRIREITAEIEVGCVYTGTVTHIVDFGAFVAICGGKEGLVHISHIAKKRV
SKVADYLKIGQKVSVKVIEIDRLGRIRLSIRDIRV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaattcatttgttcgtaaattttcatatggagagcatactgtagttttggaaagt
ggtttaattgctcgtcaatccaatgctgcagttatggctagtatgggtgataccacggtg
cttgttacagtggtaggtgttcctgatattaagacagagcaggatttttttcctcttttt
gtaagttatcaggaacgtacctatgcagctggtcgttttcctggaggcttctttcgtcgc
gaaggtcgtcctaatgaaacggaaatattgacatctcgtttaatagataggccgattcgt
ccattgtttccagagggttttttacatgaagttcaagttattgctacagtgatatcagta
aatcctcaaatcaatccggatattgtagcaattataggtgtgtcagcagcattaagtata
tctgatattccattcaatggtcctataggtgttgctcgtgttggatatataaagggtcaa
tatatacttaatccaactatggatcaattaattgatagtcgtttagatttagttattgct
ggtactgaaagtgcaattttaatggtagaatccgaagcggatgtgttgagtgaaagtgag
atgttaaatgctgttatttttgggcatgagcaacaacaaatagttattaaaaatataaaa
gaatttgcaaatgaaattggtcagtctaaatgggcgttgcgttctttagaaactagtgtt
attttacaagatcatataatagatttagcaaaatcgcgtttttgtgatgcatatcgtctt
tttgacaagagtatacgttgtgctagaattgattatattaaaaatgacataataagtctt
ttgtcagataataataatgcaaaaatggatgttaatttaattaagaatgtattaaacggt
ttagaaaagcaaattgtgcgccatcgtattttacaaggagaattacgtatagatgggcga
tcaaaggatgcggttcgtaatttagatatacgtactggtattttacctagaacgcatggt
tctgcattatttaccagaggtgatactcaagcactggtaactgctactcttggtactgaa
cgtaatgcgcaaaatattgatgaattaattggtgaacgtactgataggtttttgttacat
tataattttcctccttattgtgttggtgaagttggtttagtaggttctccaaagagaaga
gaaataggacatggtcgtttagcaaaacgtggtatactagcagtcatgccaaaaatacat
gagtttccatatacagtgcgcgttgtatcagaaattactgaatcaaatggttcgtcttct
atggcttctatttgtggtgcgtctcttgcattaatggatgcaggtgttcctattaaatct
gcagtttctggaattgcaatgggattagtaaaagaaggtagtaattttgtagtgttatct
gatattgtaggttatgaagattatataggtgatatggattttaaagtagcaggtagtcgt
caaggtattacagcattgcaaatggatattaaaattgaaggtgttactcgtgaaattatt
tatgaagcgttaaggcaagcaaaatgtggtagattatctatattagatactatggaaaaa
gttatacgagctcctcgttgtgatatttctgaatttgcgccacgtattcatactataaaa
atcaatccaggaaaaattaaggatttaattggtaaaggggggtctgtaattcgtgcttta
acagaagcaaccggtacaaatattgagatagaagatagtggtattataaaagtatcatct
gtagataaagaaaaatcatgtaatgctattcgtcgtattagggaaataactgctgaaatt
gaggtaggttgcgtgtatactggtacagttactcatattgttgattttggagcctttgtt
gctatttgtggtggtaaagagggtttggtgcacatttctcatattgctaaaaagagagtg
agtaaagttgctgattatttaaagataggacaaaaggtatctgttaaagtaatagaaata
gatcgtttaggacgcattcgtttaagtattagggatattcgtgtttga
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