Priestia filamentosa: BEH_05205
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Entry
BEH_05205 CDS
T03983
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
beo
Priestia filamentosa
Pathway
beo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
beo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BEH_05205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
beo03019
]
BEH_05205
Messenger RNA biogenesis [BR:
beo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BEH_05205
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GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AKO91551
UniProt:
A0A1X7F0M9
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Position
complement(1047255..1048922)
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AA seq
555 aa
AA seq
DB search
MKFVKNNQTAVFALGGLGEIGKNTYCIQFQDEIIVVDAGIKFPEDELLGIDYVIPDYTYL
IKNADKIRGVFITHGHEDHIGGIPYLLRELNVPIYGGKLALGLIRNKLEEHGLLRRAKLH
EIHEDDVIKFRKTSVTFFRTTHSIPDSYGIVIKTPNGQIVHTGDFKFDFTPVGEPANLTK
MAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQ
VTEAAVLHNRKIAVFGRSMEAAIQIGQDLGYISCPKDTFIEPNQINRLPANKVTILCTGS
QGEPMAALSRIASGTHRQIQIIPGDTVVFSSSPIPGNAISVSRIIDKLFRAGADVIHGPF
SDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEFRMQRMHNKLAQDCGVEAENCFIMDNGE
VLALSENEASVAGKVPSGSVYIDGNGVGDIGNIVLRDRRILSEEGLVIVVVSINMKEFKI
AAGPDIISRGFVYMRESGDLINDAQSLITKHLSKVMERRTTQWSEIKNEITDTLSPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtaaaaaacaatcaaacagcagtgttcgctttaggcggactaggtgaaatc
gggaaaaacacctattgcattcaattccaagacgaaattatcgttgttgacgctggaatt
aaatttccagaagatgaactattaggaattgattatgttattcctgactatacctactta
attaaaaacgcagataaaattcgtggagttttcatcactcatggtcatgaagaccatatt
ggaggaattccatacttattaagagagcttaatgttccaatctacggcggaaaacttgct
ctaggtcttattcgcaataaacttgaagaacatggtttacttcgccgtgcgaaacttcat
gagattcatgaagatgacgttattaagttccgcaaaacgtctgtaacgttcttccgcaca
acacacagtattccagattcttatggaattgttattaaaacaccgaacggtcaaattgtt
catacaggcgattttaaatttgattttactcctgtaggtgaaccagcaaacttaactaag
atggctgaaatcggaaaagacggagttctttgcttactttctgacagtacgaatagtgag
gttcctaacttcacaatgtctgaacgtcgagtaggagagagcattcacgatatcttccgc
aaagttgatggacgtattatatttgctacatttgcctcaaatattcatcgtcttcagcaa
gtaacggaagctgctgtactacacaaccgaaaaattgcagtattcggccgaagcatggaa
gcagcaattcaaattggtcaagatttaggctatattagctgccctaaagatacatttatt
gaaccaaatcaaattaatcgcttacctgcgaacaaagtaacaattctttgtacaggaagc
caaggagaaccaatggcagctctttctagaattgctagcggtactcaccgtcaaattcaa
attatccctggagacactgttgttttctcttcttcaccaatcccaggaaatgcgattagc
gtaagccgtattatcgacaagcttttcagagcaggtgctgacgttattcacggtccattc
agcgatattcatacatctggacacggtggacaagaagaacagaaacttatgcttcgctta
attaaaccaaagttctttatgccaattcacggggagtttagaatgcaacgcatgcacaac
aaacttgctcaagactgcggtgtagaagctgagaactgctttatcatggacaatggtgaa
gtacttgcgctaagtgaaaacgaagcatctgttgcaggaaaagtaccatctggctctgta
tatattgacggaaatggtgttggcgacattggaaatattgttttacgtgatcgccgcatc
ctatctgaggaaggccttgttattgtcgttgtaagcattaatatgaaagaattcaaaatt
gcggcaggccctgatattatttcaagaggatttgtatatatgcgtgaatctggggatctc
attaacgatgctcaatcacttattacaaaacaccttagcaaagtaatggagcgccgtaca
acacaatggtctgaaattaaaaatgaaattacggacactctttctcctttcttatatgag
aaaacaaaacgtcgtccaatgattttaccaattattatggaagtgtaa
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