Priestia filamentosa: BEH_21120
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Entry
BEH_21120 CDS
T03983
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
beo
Priestia filamentosa
Pathway
beo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
beo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BEH_21120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
beo03400
]
BEH_21120
Enzymes [BR:
beo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BEH_21120
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BEH_21120
DNA repair and recombination proteins [BR:
beo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BEH_21120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF7573
Zn_ribbon_8
DUF1631
Motif
Other DBs
NCBI-ProteinID:
AKO94378
UniProt:
A0A1X7CRR6
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All DBs
Position
complement(4273792..4274628)
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AA seq
278 aa
AA seq
DB search
MPELPEVETVRKTLINLVSGKTITRVNVLWPNIIKRPVEVAQFTDALINQKIHDVGRRGK
FLLFYLDDYTLVSHLRMEGKYRLVEQGEDLNKHDHVMMLFSDGTELRYNDVRKFGTLHLF
KKGTEFDSGPLVGLGPEPFAEEFTTASLQAGLAKTNRKVKVALLDQKIVVGLGNIYVDEA
LFRAGIHPERVSHTLGEEDIVRLHQEIIATLAEAVEKGGSTIRSYVNTQGEIGTFQHQHF
VYGKKGEPCQNCGTEIEKFTVGGRGTHICPSCQPFPRI
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccagaagtcgaaaccgttcgtaagacacttataaatcttgtaagtgga
aaaacaattacaagagtgaacgttctttggccgaatattattaagcgtcctgttgaagtt
gctcaattcacagatgctttaataaatcaaaagattcatgacgttggacgaagggggaaa
tttcttcttttttatctcgatgattatacacttgtatctcatttaagaatggaaggaaaa
tatcgtcttgtcgagcaaggggaagatcttaacaaacatgaccacgttatgatgcttttc
agtgatggaacagagcttcgttataatgacgttcgaaagtttggaacacttcatcttttt
aaaaaaggaacagagtttgattcaggtccgcttgttgggttagggccagagccttttgca
gaagagtttacaactgcatctctacaagcagggttagcgaaaacaaatcggaaagtaaaa
gtagccttactagatcagaaaattgttgtagggcttgggaatatctatgtagatgaagcg
ctgtttagagcgggaattcaccctgaacgtgtttctcacacacttggtgaagaagatatt
gttcgtcttcatcaagaaattatcgcaacgcttgctgaggcagtagaaaagggtggaagc
acaattcgttcttatgtgaatacacaaggagaaattggcacattccaacatcaacatttt
gtatatgggaaaaaaggcgagccttgccaaaattgtggaacagaaattgagaaatttact
gtaggcggacgcgggacacatatttgtccatcatgccaaccttttcctagaatataa
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