Theileria equi: BEWA_005680
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Entry
BEWA_005680 CDS
T02820
Name
(RefSeq) LSM domain-containing protein
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
beq
Theileria equi
Pathway
beq03018
RNA degradation
beq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
beq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BEWA_005680
09123 Folding, sorting and degradation
03018 RNA degradation
BEWA_005680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
beq03019
]
BEWA_005680
03041 Spliceosome [BR:
beq03041
]
BEWA_005680
Messenger RNA biogenesis [BR:
beq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BEWA_005680
mRNA degradation factors
5'-3' decay
Lsm complex
BEWA_005680
Spliceosome [BR:
beq03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
BEWA_005680
Complex C
U2 snRNP components
BEWA_005680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
LSM14
Motif
Other DBs
NCBI-GeneID:
15805806
NCBI-ProteinID:
XP_004830826
UniProt:
L0B013
LinkDB
All DBs
Position
3:complement(1174717..1175586)
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AA seq
170 aa
AA seq
DB search
MATTATTLRNGYRRPKYGAVNNTTLPLSPNVQISTAHISHPIRHSYDLNQKRHGLSVCQI
TAYLSVKSAADLFFNFFQTLVEKNAKVTIELKNDLQISGKLHAVDQYLNIKLSNVTASDT
ERYPHLLSVMNCFVRGSVVRYVFFNPEDINTEELQELCRREVMKQNIDKS
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaacagcaacgacattgagaaacggttatcggaggccgaaatatggcgctgtc
aacaatacgactttgcccctgagtccaaatgtacaaatctccacagcccacatatcgcat
ccaatacgacattcatatgatttaaaccagaaacggcatggtctatctgtctgccaaatc
acagcttatttatcagtaaaatcggctgctgatttgttttttaatttcttccaaacattg
gtggagaaaaatgccaaagtaacgatagagcttaaaaacgaccttcaaatatcaggaaaa
cttcatgccgttgatcagtacctgaatataaagctcagcaatgtgactgccagtgacact
gagcgttaccctcatttgctgtctgtgatgaactgttttgtcagaggttcggtagttcgc
tatgtcttcttcaaccctgaggacattaacacggaggaattacaagagctatgcagaagg
gaagtcatgaaacagaacattgataagtcctag
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