Theileria equi: BEWA_006360
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Entry
BEWA_006360 CDS
T02820
Name
(RefSeq) DNA-directed RNA polymerase II subunit, putative
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
beq
Theileria equi
Pathway
beq03020
RNA polymerase
beq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
beq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BEWA_006360
09124 Replication and repair
03420 Nucleotide excision repair
BEWA_006360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
beq03021
]
BEWA_006360
03400 DNA repair and recombination proteins [BR:
beq03400
]
BEWA_006360
Enzymes [BR:
beq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BEWA_006360
Transcription machinery [BR:
beq03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
BEWA_006360
DNA repair and recombination proteins [BR:
beq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
BEWA_006360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
15804824
NCBI-ProteinID:
XP_004830893
UniProt:
L0B045
LinkDB
All DBs
Position
3:1296361..1300159
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AA seq
1219 aa
AA seq
DB search
MANDYLPQYTQYVDQVAGYAGMFTKMPRVVTKTHLGSQYSGLTAPEQSQPQYDHESKYEA
PKYLKGNQEGFSDEDSWKVIGSFFSTHGLVHQQIESFNDFITYRMQEIIDEHPPIEIKPQ
PRYRPDDDLESNVTYRLKFGQLSLNKPCVEEKDGVFKHIWPQEARLRNLTYASQIYVDIE
QETYLKDETTGAETLQDKTTYPRIPLGRMPMMLKSTYCWTKGLSEEDLADVGECPYDQGG
YFIVNGGERVLIAQERMANNFIYVFKKKQPSKYSFVAEIRSQAEFSQGITPFSIMMKSSL
GAPGSRFKSHGQLVATIPYLRADIPVPILFRALGCVADRDILQRIVYDFEDKQMLNLMRA
TLEEASDYVTQETCLDFIGKRGPTVGAPLETRIQYAKDLLRQHLLPHVGTEPGSEGKKCY
FLGYMIHRLLLSRLGRINEDDREHFGKKRLDLAGPLMASSFGTLFRKMAKDARRILQQQI
DCGRAFDVAGAIRSATTITQGLQYQLLTGNWGRDREGKIVRTGVSQVLNRLTFASYLSHL
RRLNTPLGREGKMAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMCYISVGSVAATIN
EFLSEWGMDSLDEVPPEVVKDRVKIFINGTWVGCFDEADSLVRTLLELRRRGDISSETSI
VRDIVSQEVKIFTDAGRAMRPLFIVENGNTLAINKEHIAMIDNNECNWDGLVESGVIEYI
DCEEEEMCMIGMFVDDLKANNTYCSTYTHCEIHPSMILGVCASIIPFPDQNQSPRNTYQS
AMGKQAMGVYATNFNLRMDTLCHILYYPQKPLVCTRSMEFLRFRELPAGINAIVAIMCYT
GYNQEDSLIMNQSSIDRGLFRSAFNRTYISEEKYVGSTIVERFERPGTANILGLKRGDYT
KLDADGLVEPGSRVMGDDIIIGRTSTADEEDMRQDCSCCLRANENGVVDTVLVSVNAKGT
KFAKVKVRSVRVPQIGDKFASRHGQKGTIGITYRTEDLPFTCEGIVPDIIMNPHAVPSRM
TIGHLVECLIGKVGACCGMEGDATPFSKLTVQQIAERLFDCGYARHGNEAFHCGFTGQMI
TSRIFVGPTYYQRLKHMVEDKIHARSRGPSTMLTRQPTEGRSREGGLRFGEMERDCMISH
GAAKMLKERLFDQSDAYRIHVCDNCGLCCIADLNKSSFECTACDNKTNISQVAIPYACKL
LIQELMSMAIYPKLVLTPA
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgactatttgccgcaatacactcaatatgtagaccaggtggctggttatgct
ggtatgtttaccaaaatgccccgtgttgtaacaaaaacacatttagggtctcaatatagc
ggacttacagcccctgaacaaagtcagcctcagtacgatcatgaatctaagtatgaagca
cccaaatatctaaagggaaaccaagaaggattcagcgatgaagatagttggaaagtcata
ggttcattctttagtacacatggattggtccaccagcaaatcgaaagttttaacgatttt
atcacatatcgcatgcaagaaattatagatgagcatcctccaattgagataaaacctcag
ccacggtatagaccagacgacgatcttgaaagtaatgtgacatatagacttaaatttggt
caactttcacttaataaaccctgtgtagaggaaaaggatggtgtatttaagcatatttgg
ccacaagaagcgcggttgcgcaatcttacatatgcatcgcaaatttatgtggatattgaa
caagaaacatatttaaaagatgaaacaactggtgcagagacacttcaggataagacgaca
tatcctagaattccgttaggacgcatgcctatgatgttaaagtccacgtactgctggacg
aagggcctaagtgaagaagatttagcggatgttggagagtgtccgtacgatcaaggtggt
tattttattgttaacggtggtgaaagggtattgattgctcaagaacgtatggctaacaat
tttatctatgtatttaagaagaaacagccgtcaaagtatagttttgtcgcagaaattagg
tcacaagctgaattttctcagggtatcactccattcagcataatgatgaagtcaagtttg
ggagctcccggatcccgtttcaagtctcacggtcaacttgtagcaactattccatacttg
cgggcagatatacccgttccaatcctcttcagggctttgggatgtgtagccgatcgtgat
attctgcagcgtattgtctatgattttgaagacaaacagatgctcaatttgatgagagct
accctagaagaagcttctgattatgttacccaagaaacatgtctagattttatagggaaa
cgtgggccaacggttggagctccattggaaactaggatacagtatgccaaagatttgtta
agacagcatttgctcccacatgtcggtacggagcctggttccgaagggaaaaaatgctac
tttttgggctatatgatacatcgcttactcctatctagactgggaagaattaatgaagat
gacagagaacattttggtaaaaaacgcttagatttagcgggcccgcttatggcatccagt
tttggtactttgttcagaaagatggcaaaggatgccaggcgtattttacaacaacaaatc
gattgtgggagagcatttgatgtagcaggtgctattagaagtgctaccactattacacaa
gggctacagtatcaactgcttactggaaactggggaagagatagggaaggaaaaattgtt
cgcactggtgtcagccaggtgttgaatcgtctgacatttgcctcatatttgtcacatttg
cgtcgtctgaatacacctcttggaagagaagggaaaatggctaaaccacgtcaacttcac
aacactcattggggtatgatatgcccagctgaaacgcctgagggtcaagctgtcggcctt
gttaaaaatttagcactcatgtgctatattagtgttggctctgttgcggcaacaattaat
gaatttttgtcagaatggggtatggattctctagatgaggttccgcctgaagttgtaaag
gatagagtgaagatttttatcaatggaacatgggttggatgttttgacgaagcagatagt
ctggtcagaacacttctggaactacgtagacgtggagatatttcctcagaaacaagcatt
gttagagatattgtttcccaggaagtgaagatttttactgatgcaggtagagcaatgaga
ccgctctttatcgtagaaaatggaaataccctagcaataaataaagagcatatcgcaatg
attgataataatgaatgtaattgggatggattggtggaatctggtgttattgaatatatt
gactgtgaagaggaagagatgtgtatgattggaatgtttgtagatgaccttaaggcaaac
aatacgtattgtagcacgtatactcattgtgaaattcatccatctatgattttgggtgtt
tgtgcatctataatcccattccccgatcaaaatcagtccccaagaaacacctaccaaagc
gctatgggaaagcaagctatgggtgtgtatgcaactaactttaaccttcgtatggataca
ttgtgccatattctttactatccccaaaagcctttggtgtgcacaagatctatggaattc
ttacgatttagggagcttcccgctggtataaacgcaattgttgcaatcatgtgttacaca
ggttataatcaagaggatagtttgattatgaatcaatcatccatagatagaggtcttttc
aggagtgccttcaatagaacttatattagcgaagaaaaatacgttggaagtacgatagtt
gagcgttttgaacgccctggaacagccaatattcttggcctaaagaggggagattataca
aaattagatgctgatgggttagttgagcctggtagcagagtaatgggagatgatatcatc
attggtagaacttctactgctgacgaagaagatatgcgtcaagattgctcttgttgtcta
agagctaatgaaaatggtgttgtagacactgttcttgtttctgtaaatgcaaagggtacg
aaatttgcaaaggtaaaggtcagatcagttcgtgtccctcaaattggtgacaagtttgct
agtagacatggtcagaagggtactattggaataacatatagaacagaggatctaccattt
acatgtgaaggaattgtaccggatattatcatgaaccctcacgctgtaccgagcagaatg
acgattggacatttggtagaatgtctaattggaaaagttggtgcctgttgtggtatggaa
ggtgatgctactccattctctaagctgactgttcaacaaattgcagagcgtctattcgac
tgtggatatgctaggcatggtaatgaggcattccattgtggtttcacaggtcaaatgatc
actagtagaatttttgttggtcccacatactaccaaagactaaaacacatggtagaggat
aaaattcacgcaagatccagaggaccgtccactatgttaaccagacaacctactgaaggt
cgatcaagggaaggaggtctcaggttcggagaaatggaaagggattgtatgatatcacac
ggagcagcaaaaatgcttaaggaacgtttgtttgatcagagcgatgcctatagaatacat
gtctgcgataactgtggactttgttgtatcgcagatctgaataagtcaagtttcgagtgt
acagcttgcgataacaagacaaatatctcgcaagttgccataccttatgcttgtaaatta
ctcattcaagagcttatgtcaatggcaatctacccaaaactcgtacttacccctgcttga
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