Bernardetia aquimarina: ACE193_20450
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Entry
ACE193_20450 CDS
T11706
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
ber Bernardetia aquimarina
Brite
KEGG Orthology (KO) [BR:
ber00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
ACE193_20450
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Ortholog
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GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
HH_EMRA
Beta-barrel_AprE
BSH_CusB
HH_CzcB
Beta-barrel_YknX
HH_YBHG
YknX_C
CzcB_C
BSH_CzcB
Biotin_lipoyl
BSH_YknX
BSH_LcnD
RND-MFP_C
Beta-barrel_RND_2
APG6_N
Motif
Other DBs
NCBI-ProteinID:
XHD13571
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Position
complement(4780839..4782185)
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AA seq
448 aa
AA seq
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MSNKNLFIIIGAVVLLVVLGVTGKKMGWFGAEDGIEVEFSPVKRIQIVERVSASGKIYPE
VEVKLSPDVSGEITELLVKEGDSVKEGQLLLKIRPDTYQTAVDRTRASLGSQGANIEQAN
ARLQQAKAQYFRAKADFGRQQKLFDDKIISLQDFQAAESTFKVAEAELQAAEKTVESARY
SLQSARATLEEAQANLSLTTIFAPQSGIISSLNVEQGERVVGTVQMTGTELLRIAEFKNM
EVRVNVNENDIIRIEMNDTAYVEVDAYPDQKFIGIVTYISRSANNLQTVTADAVTEFEVK
IRMSRDSYKELLEKRNFPFLPGMTASVEIITNRKNNALAVPLAAVTVRNSKYNNEEEKED
SPRGKPKKETTKNEKLEEDKMKEVIFVRDGENQVKMVEVKTGLSDFDNIEILSGVEEGKE
VVVAPYNAISKTLEDESTVKIAKDKKAK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaaaatctttttatcattattggtgctgtcgtcttacttgttgttttgggt
gttacaggaaaaaaaatgggttggtttggtgctgaagatggaattgaagtagagttttct
ccagtcaaacgcattcaaattgtcgaaagagtaagtgcatcaggaaaaatttatcccgaa
gtagaagtaaaattatctccagatgtttcgggagaaattactgaattattggtaaaagaa
ggtgattcggtaaaagaaggacaattacttctaaaaatccgtcctgatacatatcaaact
gccgtcgaccgaactcgtgcttctctaggttcgcaaggagcaaatatcgaacaagccaat
gcacgcttacaacaagcaaaagcacaatattttagagcaaaggcagattttggaagacaa
caaaaactctttgatgataaaataatctcattacaagattttcaagcagcagaatctact
ttcaaagtagctgaagcagaactccaagctgccgaaaaaacagtagaatctgcaagatat
tctctccaaagtgctagagcaacattagaagaagcacaagcaaacttatcacttactact
atttttgctcctcaaagtggaattatttcttctttgaatgtcgaacaaggtgagcgtgtc
gtgggaactgtacaaatgacaggaacagaacttttgcgtattgcagaattcaaaaatatg
gaagtcagagtaaacgtaaatgaaaatgatattattcgtatcgaaatgaatgatacggcg
tatgtagaagttgatgcttatccagaccaaaaatttataggaattgttacttatatttca
aggtctgccaataatttacagactgttacggctgatgctgttactgagtttgaagtaaaa
attagaatgagtagagattcgtataaagaattattagaaaaaagaaattttccttttctt
ccagggatgacggcaagtgttgagattataacaaacagaaaaaataatgcgttagctgtt
ccactagcagccgttacagtaagaaacagtaaatataataatgaagaggaaaaagaagat
tcgcctagaggaaaacctaaaaaagaaacaactaaaaatgaaaaattagaagaagataaa
atgaaagaagtaatttttgtcagagatggcgaaaatcaagtaaagatggtagaagtaaaa
acaggacttagtgattttgataatatcgaaattttgagtggtgtagaagaaggaaaagaa
gtagttgttgctccttacaatgcaatttctaaaactttagaagatgaaagtactgtcaaa
attgcaaaagacaaaaaagcaaagtaa
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