Bifidobacterium eulemuris: BE0216_06080
Help
Entry
BE0216_06080 CDS
T06951
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
beu
Bifidobacterium eulemuris
Pathway
beu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
beu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BE0216_06080 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
beu03021
]
BE0216_06080 (rho)
03019 Messenger RNA biogenesis [BR:
beu03019
]
BE0216_06080 (rho)
Transcription machinery [BR:
beu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BE0216_06080 (rho)
Messenger RNA biogenesis [BR:
beu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BE0216_06080 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
SAP
Spore_III_AA
PIP5K
Motif
Other DBs
NCBI-ProteinID:
QOL32078
UniProt:
A0A7L9SP02
LinkDB
All DBs
Position
complement(1361010..1363085)
Genome browser
AA seq
691 aa
AA seq
DB search
MATSQNLEDMKLSELKELAKQMGLRGTSTMRKPDLLATLQAARSGGEAPAGVTVRAPKAA
SPAASPAASQVAEPVAPAAAESASAQAPQAAAPETKPDADDRPKKSAKDGAARRSSGRTS
RTATRAKGAHPDVPADAANLFDELGIDAPIAQNEPRGARDAKKRDRAPQLDENGDEVIVA
NVRRRRRPEPVLAPEPEEGVRDLDDILATLPTQKHESRDEAEPERPRRARRDRNADDHGD
RAERGERNDRAERNERGDRNDRNDRNDRNVERGVDRRGRRLRGRDRDMEDQRGEERVARE
DRRREEPAEDMVPVAGIVDVLDSYAFVRTSGYLPGPNDVYVSMGQVKKYGLRKGDAVHGT
IRAPREGDRRNQRQKFVPLQAIDSINGMSVEEAANRPQFAKLTPLYPQERLKQETTANKL
TGRIMDIVSPIGKGQRGLIVSPPKAGKTITLQNIANAITANNPEVHLMVVLVDERPEEVT
DMERTVAGEVISSTFDRPASDHTTVAELAIERAKRLVELGQDVVVLLDSMTRLARAYNIA
APASGRILSGGVDAQALYPPKKFFGAARNIENGGSLTIISSALVETGSKMDEVIFEEFKG
TGNMELRLSRELADKRLFPAIDINASGTRREELITAPDELPVVYRLRRLMGGMEPEQAYQ
TLVPRLKKTASNRDFLAAIVQQQGGGAVNGN
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacaagccagaatcttgaagatatgaagctctccgagctcaaggagctcgccaag
cagatgggtcttcgtggcacttccaccatgcgcaagcccgatctgcttgccaccctgcag
gccgcccgttccggtggcgaagccccggccggtgtgaccgtgcgcgcgcccaaagccgcc
tctccggccgcctctccggctgcctcgcaggtcgctgagccggtcgctccggcggccgcc
gaatcggcctccgcgcaggctccgcaggccgccgctcctgaaacgaagccggacgctgac
gaccggccgaagaaatcggcgaaagacggcgccgcccgccgtagctccggccgtaccagc
cgtaccgccacccgcgccaaaggcgctcatccggacgtgccggccgacgccgccaacctg
ttcgacgaattgggcatcgacgcgcccatcgcccagaacgagccgcgcggcgctcgcgac
gccaagaagcgcgatcgcgcgccgcagcttgacgagaacggcgatgaggtgatcgtggcc
aatgtgcgccgtcgccgccgtcccgaacccgtcctcgcgcccgaacccgaagagggcgtg
cgcgatctcgacgacatcctcgccactctgcccacgcagaagcacgaatcccgcgacgaa
gccgagcccgagcgtccgcgccgcgcgcgtcgcgaccgcaacgccgatgaccacggtgat
cgtgccgaacgcggcgagcgcaacgaccgtgccgagcgtaacgaacgtggcgatcgcaat
gaccgtaacgatcgcaacgatcgcaatgtcgaacgtggcgtcgaccgccgtggacgtcgc
ctgcgcggccgcgaccgcgacatggaggaccagcgcggcgaggagcgcgtggcgcgcgag
gatcgccgccgcgaagagccggccgaagacatggttcccgtggccggcatcgtcgacgtg
ctcgactcctatgccttcgtgcgcacctccggatacctgcccggccccaacgacgtgtac
gtctccatgggccaggtcaagaaatacggcctgcgcaagggcgacgccgtgcacggcacg
atccgcgccccgcgtgagggcgaccgtcgcaaccagcgccagaagttcgtgccgttgcag
gccatcgactcgatcaacggcatgagcgtcgaagaggcggcgaaccgtccgcagttcgcc
aagctcaccccgctctacccgcaggagcgtctcaagcaggagaccacggccaacaagctc
accggccgcatcatggacatcgtctcgccgatcggcaagggccagcgcggtctgatcgtc
tccccgccgaaggccggcaagacgatcaccctgcagaacatcgccaacgcgatcaccgcc
aacaaccccgaagtgcacctgatggtggtgctggtggacgaacgccccgaagaggtcacc
gacatggagcgcaccgtggccggcgaggtcatctcgtcgaccttcgaccgccccgcctcc
gaccataccacggtcgccgaactcgccatcgagcgcgcgaagcgactggtggagcttggc
caggacgtggtggtgctgctcgactcgatgacccgtctggcccgcgcctacaacatcgcg
gccccggcttccggacgcatcctgtccggcggtgtggacgcgcaggcgctgtatccgccg
aagaagttcttcggcgcggcccgcaacatcgaaaacggcggctcgctgaccatcatctcg
tccgcgctggtggagaccggctcgaagatggacgaggtgatcttcgaggagttcaagggc
accggcaacatggagctgcgtctgagccgcgaactggccgacaagcgcttgttcccggcc
atcgacatcaacgcctccggcacccgccgcgaggagctgatcaccgcgccggacgagctg
ccggtcgtctaccgtcttcgtcgcctgatgggcggtatggagccggagcaggcctaccag
actctggtgccgcgcctgaagaagaccgccagcaaccgcgacttcctcgccgccatcgtg
cagcagcagggcggcggcgccgtcaacggcaactga
DBGET
integrated database retrieval system
