Pseudobdellovibrio exovorus: A11Q_1290
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Entry
A11Q_1290 CDS
T02492
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bex
Pseudobdellovibrio exovorus
Pathway
bex03030
DNA replication
bex03430
Mismatch repair
bex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A11Q_1290
03430 Mismatch repair
A11Q_1290
03440 Homologous recombination
A11Q_1290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bex03032
]
A11Q_1290
03400 DNA repair and recombination proteins [BR:
bex03400
]
A11Q_1290
Enzymes [BR:
bex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A11Q_1290
DNA replication proteins [BR:
bex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A11Q_1290
DNA repair and recombination proteins [BR:
bex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A11Q_1290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AGH95506
UniProt:
M4VBW9
LinkDB
All DBs
Position
1310725..1314261
Genome browser
AA seq
1178 aa
AA seq
DB search
MSFVHLHTHSEYSLLEAACRVKAIAKKAAEYQMPAVALTDNGNMFGAIEFYFACRDKNVK
PILGLDAYMAPASRHEKKQDPNQRFSEIALGPRRLVLLAQNFKGYQNLCKLSSIGYQEGF
YWKPRIDNEVLKEYGSDLICLTGGFRGELADTFFKEGPEAALKRLKELKEVFDDRLYLEM
CRTKPEWDDVNNFILEASKILHLPVVATNDVHYLSADDQIAQEVLVCIGSNKTLSDESRF
QLGSSEFYFKNPNQMQELFADIPDAVKNTLEIAERCDVKFKLKDENGKQIYHLPSFPTEE
GRSVVEEIAFRAKSGLEKRFEELTAQGRTFTEENKKDYYDRLSYELSIIDRMGFNGYFLI
VQDFINWAKNHDIPVGPGRGSGAGSLVAYSLRITDLDPLPNFLLFERFLNPERISMPDFD
IDFCQDRRQEVIQYVTNKYGSASVSQIITYGKLQTRAAIKDVGRVLGLTFAEVDQVSKLI
PDKLGITLSESLEMEPRIREMMEMNPTIDTLIGLALKVEGMVRHAGIHAAGVIIADGDLT
SHAPMYKGADDENVVQYDMKHAEKIGLIKFDFLGLKTLTHINQALKIVAKNRGVKITESE
IDINDGKIYELLSRGDTAGVFQFEGEGITDATRKIKPSSFADITAITSLYRPGPMANIPD
FTKRKHGESPVEYLLDDTKKVLEETYGIMVYQEQVMGIASLISGYSLGEADMLRRAMGKK
IKEEMDQHRVRFINGAVERGHDQKKSEELFELMYKFADYGFNKSHAAAYSVLTAQTAWIK
HYYPAEFFAALLSTEVANTDNVVKYVKDAQKRGLVVRTPNVNFSDYLFTVNGEEIYFGLG
AIKGVGQSAVEAILEARNTLENKKFSSMEEFFNTIDLKRVNKRVIESLIKAGAFDDFEYH
RAQLMAGYPQFLDRAAESQKDRDLGQVSLFELASKEESKVVLPKVDVWTRMEALSFEKEV
LGFYLSDHPLRGFENFSKVWSSCSVLELPEYFEKAKGAQADKPKEKPKWGEPRNKTRVIL
AGLIAEHKELITKKGTRMAFGRLEDLTGSVELVIFPDTFSKYGHLLKEEKPVLIGGGLEV
EEGNPKIIVDSFALFDEVLVKTKKISMRLDKIDKDDFEKLSQMLDENKGNTDVCLIMNID
GEQIELIPEEGKKVQISDGFFEGIHQLFGRTDFIEVNN
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgttcaccttcacactcattcagaatactctcttttagaagccgcttgccga
gttaaggctatagctaaaaaggcagctgaataccagatgcccgcagtggctttaactgac
aatgggaatatgttcggagccattgagttttactttgcttgccgtgataaaaacgtgaag
cctattttagggctagatgcctatatggcgccggcttcgcgccatgaaaaaaagcaggac
cccaaccaaagattttccgagatcgctctagggccacgccgtttagtattgttagcacaa
aattttaaaggctatcaaaatctatgcaaattgagttctattgggtatcaagagggtttt
tattggaaacctcgtattgataatgaagttctgaaggaatatggttccgatcttatttgt
ctgacaggtggattccgcggtgagctggctgatactttctttaaagaaggtccagaagcg
gcattgaagcgattaaaagagctaaaagaagtttttgatgatcgtctttatcttgaaatg
tgtcgtacaaaaccagaatgggatgatgttaataactttattctagaagcttcgaaaata
ttacatcttcccgttgtcgcaactaacgatgtacattacctcagcgcggatgatcaaatt
gcgcaagaggttctggtttgtattggaagcaataaaacattgtcagatgaatctcgattt
caacttggcagttcggaattttattttaaaaacccgaatcaaatgcaagagttgtttgct
gacattccagatgccgttaaaaatacacttgaaatcgcagaaagatgcgatgttaagttc
aaattaaaagacgaaaatggaaagcaaatttatcacttaccgagctttccgacagaagaa
gggcgtagtgttgttgaagagatcgccttccgtgctaaatccggtttagaaaaacgcttc
gaagaattaacggctcaaggccgcacatttactgaggaaaacaaaaaagattactatgat
cgcctcagctatgagctgagtatcattgatcgcatgggttttaatggatactttttgatc
gtccaagacttcatcaactgggcgaaaaatcatgatattcctgtgggaccaggtcgtggt
tcgggtgctggttctttggtggcctacagcttaagaattacagatttagacccactaccg
aattttcttctattcgaacgtttcttaaatcccgaacgtatttcgatgccggatttcgat
atcgatttctgtcaggatagacgccaagaagtgatccagtacgttacaaataaatatgga
tcggcttcggtttcccagattatcacttacggaaaactacagacgcgtgcggcgattaaa
gacgtcggccgcgtgctggggctaacgtttgctgaagtggatcaggtatcaaaactgatt
ccagataaattgggcatcactttaagtgaatctttagaaatggaaccgcggattcgtgaa
atgatggaaatgaatccgactatcgatactttaataggattagccctaaaagtagaaggt
atggttcgccatgcgggtattcacgccgccggagttatcattgccgatggagacttaaca
tctcatgctcccatgtacaaaggggctgacgacgaaaacgttgttcagtacgacatgaag
catgccgaaaaaatcggccttattaaattcgacttcttaggtttaaaaacactaactcat
atcaatcaagccttaaagattgttgcgaaaaatcgtggtgttaaaattacggaaagcgaa
atcgatatcaatgatggtaaaatttatgagttactttcgcgcggtgatacagctggggtc
ttccagttcgagggtgaggggattacagatgccactcgtaaaattaaaccttcgagtttt
gcggatatcacggcgattacctcgttatatcgtccgggtccgatggcaaatattcctgac
ttcactaagcgtaagcacggggaaagtccggttgagtacctattagacgacacaaaaaaa
gttttggaagagacctatggaattatggtctaccaagaacaagttatgggtatcgcttct
ttgatttcaggatatagtcttggtgaagccgatatgcttcgtcgtgcgatgggtaagaag
atcaaagaagagatggatcagcatcgcgtgcgctttatcaatggcgctgtcgagcgcggt
catgatcagaaaaaatcagaagaacttttcgaattgatgtataaatttgccgattatgga
tttaataaatcccatgcggcagcttactctgttttgacggctcagaccgcatggattaaa
cattattatccagcagaattttttgcggccttactttcaacagaggtcgccaacacagac
aacgtcgtcaagtacgtaaaagatgctcaaaaacgtggtctggtggttcggactccgaat
gtgaatttttcggattacctgtttacagtaaatggtgaagaaatctatttcggtttggga
gccattaaaggcgtggggcaatcggcagtagaggcgattttagaagcgcgtaatactctg
gaaaataaaaaattctcttctatggaagagtttttcaatacaatagatttaaaacgcgtc
aacaaacgtgtaattgaaagtttaattaaagccggtgcttttgatgactttgaatatcat
cgtgctcagttgatggcgggatatcctcagtttttagatcgtgctgccgaatcacagaaa
gatcgtgatttaggacaagtatctttatttgaactcgcttctaaagaggaatccaaagtc
gttttaccaaaggtagatgtttggacgcggatggaagctctgtcttttgaaaaagaggtt
ctagggttctatctgagtgatcatcctctaagaggatttgaaaatttttcgaaggtctgg
tcttcgtgtagtgttctggagcttcctgagtactttgaaaaagctaaaggtgcacaagct
gataaaccgaaggaaaaaccaaagtggggcgagcctcgtaataaaacacgtgttatcctt
gcgggtctaattgctgaacataaagagctgattactaaaaaaggaacgcggatggcgttc
ggtcgactggaagatttgacaggttcggtagagcttgtaatctttccggatacattttca
aaatatggtcacctcttgaaagaggaaaagcccgttcttattggcggtggcctagaggta
gaagagggaaatcctaaaatcatcgtcgatagctttgctctttttgatgaggttcttgta
aaaactaagaaaatctcgatgaggttggacaagatcgataaagatgattttgaaaaactt
tcgcagatgttggatgagaataaagggaacacagacgtttgtcttatcatgaatatagac
ggcgagcagattgagctgattccagaagaaggtaaaaaagtgcagatatcagatggcttt
tttgagggaatacaccagctttttggccgtacggactttattgaagtgaataattaa
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