KEGG   Pseudobdellovibrio exovorus: A11Q_1537
Entry
A11Q_1537         CDS       T02492                                 
Name
(GenBank) putative DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
bex  Pseudobdellovibrio exovorus
Pathway
bex03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A11Q_1537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bex03021]
    A11Q_1537
   03400 DNA repair and recombination proteins [BR:bex03400]
    A11Q_1537
Enzymes [BR:bex01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     A11Q_1537
Transcription machinery [BR:bex03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     A11Q_1537
DNA repair and recombination proteins [BR:bex03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      A11Q_1537
SSDB
Motif
Pfam: RNA_pol_Rpb6 AAA_7
Other DBs
NCBI-ProteinID: AGH95753
UniProt: M4V954
LinkDB
Position
complement(1560829..1561068)
AA seq 79 aa
MARVTVEDCMDKVPNRFALVLLVAKRAKQLLKGSDCTVATKNNKYIVNSLREVAIGNVGF
ESKIDPQTAQTEMLKDLNK
NT seq 240 nt   +upstreamnt  +downstreamnt
atggctcgtgtaacggttgaagattgtatggataaggttccgaaccgttttgctttggtt
ttgttggtagcgaaaagagctaaacaacttctaaagggtagcgactgcactgttgccact
aaaaacaataaatacattgtaaattcattacgtgaagtggcgatcggcaatgtgggtttt
gaatctaagatcgatccacaaacggcgcaaactgagatgcttaaggatcttaataagtag

DBGET integrated database retrieval system