Pseudobdellovibrio exovorus: A11Q_1887
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Entry
A11Q_1887 CDS
T02492
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bex
Pseudobdellovibrio exovorus
Pathway
bex03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A11Q_1887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bex03021
]
A11Q_1887
03400 DNA repair and recombination proteins [BR:
bex03400
]
A11Q_1887
Enzymes [BR:
bex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A11Q_1887
Transcription machinery [BR:
bex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A11Q_1887
DNA repair and recombination proteins [BR:
bex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A11Q_1887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HMD
Motif
Other DBs
NCBI-ProteinID:
AGH96103
UniProt:
M4VA65
LinkDB
All DBs
Position
complement(1916258..1917292)
Genome browser
AA seq
344 aa
AA seq
DB search
MQEHYYKFWRELIKPKGFEIEKDTQSLEYAKFVVRPLERGFGVTLGNSLRRILLSSMMGS
AVTAVKFEGVLHEFSTIPDVLEDVSDIILNLKQVRFRQYNSEALTLKISKKGPGVVTAAD
ISTSDKIEILNPHQHIATLGNNATFNAELIVSYGRGYAPVENSAEDLPVGFIGVDALHSP
IRKVNYSVSNARVGQRTDYDSLALEVWTDGSLKPEEAVSLASKILKEQLQIFLTFDESLE
PTDEVRGAGTSSLNENLFRSVDDLELSVRSANCLKNANIRFIGELVVRSEAEMLKTKNFG
RKSLNEIKEILTTMGLGLGMKIEGWPPPGWDPNQMPVSVKKEVQ
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagcactattataaattttggagagagttaattaaaccaaaaggattcgagatc
gagaaagatactcaatctttagagtacgctaaatttgtcgtacgccctcttgaaagaggt
tttggtgttactcttggaaattcattaagaagaattctattaagctctatgatgggatct
gcagtaactgcagtgaaattcgaaggtgttttacatgagttctcgactattccagatgtg
cttgaagatgtttctgatattatccttaacttgaaacaagttcgtttcagacagtataac
tcagaagctttgacattgaaaatttcaaaaaaaggtcctggtgtagttacggctgcagat
atctctacatctgacaaaattgaaattttgaatcctcaccagcacattgctacattgggc
aataatgcaactttcaacgctgagttgatcgtttcttatggtcgcggttatgctcctgtt
gagaacagtgctgaagatctaccagttggatttatcggtgttgatgctcttcacagcccg
atcagaaaagttaactattcagtttctaatgctcgcgtaggacaaagaacagattacgat
tctttggctttagaagtatggactgatggttctttgaagcctgaagaagcagtgtctttg
gcgtcaaaaatcttaaaagaacaattacagatcttcttaacttttgatgaatcacttgag
ccaactgacgaagttagaggcgcaggtacatcatcattgaatgaaaatctgttccgctca
gttgatgatttagagttgagtgttagatctgctaactgcttgaagaatgcgaatattcgc
ttcatcggtgagttagttgtgagatctgaagctgaaatgttgaagactaaaaacttcggc
cgtaaatcattaaatgaaattaaagaaatcttaacgactatgggcttgggtcttggaatg
aagatcgaaggatggccacctccgggatgggatcctaaccaaatgccagtgtcagttaaa
aaagaagtgcagtaa
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