Pseudobdellovibrio exovorus: A11Q_2016
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Entry
A11Q_2016 CDS
T02492
Name
(GenBank) hypothetical protein
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bex
Pseudobdellovibrio exovorus
Pathway
bex00470
D-Amino acid metabolism
bex00550
Peptidoglycan biosynthesis
bex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bex00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A11Q_2016
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A11Q_2016
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bex01011
]
A11Q_2016
Enzymes [BR:
bex01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
A11Q_2016
Peptidoglycan biosynthesis and degradation proteins [BR:
bex01011
]
Precursor biosynthesis
Amino acid ligase
A11Q_2016
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
MurD_N
2-Hacid_dh_C
Pyr_redox
NAD_binding_7
TrkA_N
Shikimate_DH
Pyr_redox_2
HcgC
NAD_binding_8
KARI_N
Pyr_redox_3
Exonuc_V_gamma
Sacchrp_dh_NADP
ThiF
F420_oxidored
NAD_binding_2
FMO-like
THF_DHG_CYH_C
Tape_meas_lam_C
Motif
Other DBs
NCBI-ProteinID:
AGH96232
UniProt:
M4VA00
LinkDB
All DBs
Position
complement(2053111..2054502)
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AA seq
463 aa
AA seq
DB search
MWKDVAELKDKKILIVGLGRTGVALAKFLTKHEAQVTVTDHKSKPELSAQLEQLEGYTNI
KFELGSHSPKTFLSQDLVILSPGVAPHLKIFEYARQQGIKITGEFEFVSAFIKEPVVAIT
GTNGKTTVARLAESMLKESGVTCWVGGSTETPLTNYLLQEERARVVLVEVSSFMLEHVND
FSAVNVVFTNLAENHLERYRSMEDYVNAKRKIFKNTNQATTSILNADDNAVVELARDPAV
QRGRIFYFSRKPALEPQIMNIGGAVNVGDELRVRTGPEIESFSIKNIKMKGKHAIENVMA
ALLLAREHGATHEAVQKVIDAFGGLRHRLEYVRKVGGVLFYNDSKATNVHAVSRALDCFD
ENVILIAGGKDTNLNYGPLQNMIKRKVKTLILVGEAKERINRDLGDFSETYLIGTFEEAV
LIAYQKSRIGDIVLLSPGCSSFDMFDSYEERGDYFKEIVKKFK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaagacgttgcagagttaaaagataaaaagattttgattgtgggcttaggtcgt
acgggtgtggctcttgcgaagtttctgacaaaacacgaagcgcaagtgacagtaacagat
cacaaatctaaaccagagctttcggctcagttagaacaactagaaggctacacaaatatc
aagtttgaattggggtcacattcaccgaagacatttttgtctcaggatttagtgatttta
tctccgggcgtggctccgcatttgaaaattttcgaatacgctcgtcagcagggaatcaaa
atcacaggcgagttcgagtttgtttcggctttcattaaagagcctgttgtggcgattaca
ggtacaaacggaaaaaccactgtagctcgcttagctgagtcgatgttaaaagaaagcggc
gtaacctgctgggtggggggatctacagaaactccactgacaaactatcttttacaagaa
gagcgtgcgcgagttgttctagttgaggtttctagctttatgttggaacacgtaaatgat
ttctcggcagtgaatgttgttttcacgaatttagccgaaaaccatttagagcgttaccgt
tcaatggaagattacgtgaacgcaaaacgcaaaatctttaaaaacacaaaccaagctact
acttctattttgaatgcggatgacaatgctgttgttgagttagcacgtgatccagcagtt
cagcgtggacgtattttctatttctctcgcaaaccggcattagagccacagatcatgaat
atcggtggagctgtcaatgtaggtgatgaattgcgtgttcgtacgggccctgagatcgag
tcattctcgatcaaaaacattaagatgaagggtaaacatgcgattgaaaatgtcatggcg
gctttattgctggcacgtgagcatggcgcgacccacgaggccgttcagaaagtcatcgat
gcattcggtggtcttcgtcatcgtcttgagtatgttcgtaaagtgggcggagttttattc
tacaatgattctaaggcgactaacgttcatgcggtttcgcgtgcattggattgctttgac
gaaaacgtaatcctgattgctggtggtaaagatacgaatctgaactacggcccgttacaa
aacatgatcaaacgtaaagtgaagacactgattcttgtgggtgaagcgaaagagcgtatc
aaccgcgatttaggtgatttttcagagacctatctgatcggtacattcgaagaagctgtc
ttgattgcttaccaaaagtcgagaattggcgacattgttctattgtcaccgggatgttct
agctttgatatgtttgacagttacgaagagagaggagactattttaaagagatcgttaaa
aaattcaaatga
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