Pseudobdellovibrio exovorus: A11Q_2381
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Entry
A11Q_2381 CDS
T02492
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bex
Pseudobdellovibrio exovorus
Pathway
bex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A11Q_2381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bex03019
]
A11Q_2381
03110 Chaperones and folding catalysts [BR:
bex03110
]
A11Q_2381
03029 Mitochondrial biogenesis [BR:
bex03029
]
A11Q_2381
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bex04147
]
A11Q_2381
Enzymes [BR:
bex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A11Q_2381
Messenger RNA biogenesis [BR:
bex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A11Q_2381
Chaperones and folding catalysts [BR:
bex03110
]
Heat shock proteins
HSP60 / Chaperonin
A11Q_2381
Mitochondrial biogenesis [BR:
bex03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A11Q_2381
Exosome [BR:
bex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A11Q_2381
Exosomal proteins of other body fluids (saliva and urine)
A11Q_2381
Exosomal proteins of breast cancer cells
A11Q_2381
Exosomal proteins of colorectal cancer cells
A11Q_2381
Exosomal proteins of bladder cancer cells
A11Q_2381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
MreB-like_C
Pho88
Motif
Other DBs
NCBI-ProteinID:
AGH96597
UniProt:
M4VB36
LinkDB
All DBs
Position
complement(2430386..2432032)
Genome browser
AA seq
548 aa
AA seq
DB search
MSKILVFSEDARSNILKGVNTLANAVKVTLGPKGRNVVIDKSFGSPLITKDGVTVAKEIE
LENKFENMGAQMVKEVASKTNDEAGDGTTTATVLAQAIYREGAKLVSAGHNPMSVKRGID
KAVALIIEELKNMAKPVKGSNEVAQVGAISANNDKEIGEMLANAMDKVGREGVITIEDSK
TAKTEVTTVEGMQFDRGYLSPYFVTNAEKMEAVLENAYVLIYDKKISSMKDMIGVLEAVA
KQGRPLLIIAEDVDGEALATLVVNKLRGTLHVCAVKAPGFGDRRKAMLEDIAILTAGQVI
SEDLGMKLEQANATHLGVAKRIVVDKDNTTVIDGSGKKADITARVNQIKAQIEETTSDYD
KEKLKERLAKLAGGVAVIHVGGGSEIEMKEKKHRVEDALNATRAAVEEGIVAGGGTALLR
ASQKIATAKFTEDELIGAKIVKRACEEPIRQISANAGLDGAIVVDRILQEKSATYGYNAF
SDEYTDLLKDGVIDPVKVVRCALTNAASVSSLMLTTETMIAEAPKKDAPAAGGHGHGMPD
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaattttagtattttcagaagatgcacgtagcaacatcttaaaaggtgttaac
actttggctaacgctgtaaaagtaaccctaggacctaaaggtcgtaacgtagttatcgac
aaatctttcggttcaccacttatcactaaagacggtgttactgttgctaaagaaatcgaa
ttagaaaacaaattcgaaaacatgggcgcgcaaatggttaaagaagttgcttctaaaact
aatgacgaagccggtgacggaacaacaactgcaactgtgttagcacaagcaatctatcgc
gaaggcgctaaattggtttctgctggtcacaacccaatgtctgtaaaacgtggtatcgac
aaagccgttgctttgatcatcgaagaacttaaaaacatggcgaaaccagttaaaggttct
aacgaagtagctcaagttggtgctatctctgctaacaacgataaagaaatcggtgaaatg
ttagcaaacgcgatggataaagttggccgtgaaggtgttatcactatcgaagattcaaaa
actgctaaaactgaagtgactactgttgaaggtatgcaatttgatcgcggttacttgtct
ccgtacttcgtaactaacgcagaaaaaatggaagcagttttagaaaacgcttacgtttta
atttacgacaaaaaaatctcttcaatgaaagacatgatcggtgttcttgaagcggttgca
aaacaaggtcgtccattgttaatcatcgctgaagatgttgacggtgaagcattagcaact
ttagttgttaataaattgcgtggcactttacacgtatgtgctgttaaagctccaggcttt
ggcgacagacgtaaagctatgttggaagacatcgcgattttgactgctggccaagtgatc
tctgaagatcttggtatgaagttagaacaagctaacgcaactcacttgggtgttgctaag
cgcatcgttgttgataaagacaacacgactgttatcgatggttctggtaaaaaagctgac
atcacagctcgcgtaaaccaaatcaaagctcaaatcgaagaaacaacttctgactatgac
aaagaaaaactaaaagagcgcttagctaaattagctggcggtgttgcagttatccacgta
ggtggcggttctgaaatcgaaatgaaagagaaaaaacaccgtgttgaagatgctttaaat
gcaactcgcgctgctgttgaagaaggtatcgtagctggtggtggtacggcgctattgcgt
gcttctcaaaaaatcgcgactgctaaattcactgaagacgaattaatcggcgctaaaatc
gtcaaacgcgcttgtgaagagccaatccgtcaaatctctgcaaatgcaggtcttgatggc
gcaatcgttgttgaccgtatcttacaagagaagtctgcaacttacggttacaatgcattc
agcgatgaatacactgacttgttaaaagacggcgttatcgatccggttaaagttgttcgt
tgtgcattaacaaatgcagcatcagtttcttcattgatgttaacaactgaaacaatgatt
gcggaagctccgaaaaaagacgctccagcagcaggtggccacggtcacggaatgccagac
atgggcggcatgggcggtatgatgtaa
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