Pseudobdellovibrio exovorus: A11Q_323
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Entry
A11Q_323 CDS
T02492
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bex
Pseudobdellovibrio exovorus
Pathway
bex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A11Q_323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bex03000
]
A11Q_323
03400 DNA repair and recombination proteins [BR:
bex03400
]
A11Q_323
Enzymes [BR:
bex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
A11Q_323
Transcription factors [BR:
bex03000
]
Prokaryotic type
Helix-turn-helix
AraC family
A11Q_323
DNA repair and recombination proteins [BR:
bex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A11Q_323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
OGG_N
AAA_16
Ubiquitin_2
Motif
Other DBs
NCBI-ProteinID:
AGH94543
UniProt:
M4V5U6
LinkDB
All DBs
Position
308684..310138
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AA seq
484 aa
AA seq
DB search
MKAKSDIYYSAMIARDPRFDGKFFIGVKTTGIYCRPICPAKPKKENIEYFHSHIEAEKAG
YRPCLRCRPESAPLSPAWVGKSAVVQRAVKVLNSQDTIEFSEDQFAVQFGVSARHLRRLF
IEEIGKTPKQLSFENRLNLARKLITETVLPMSEVAYAAGFSSVRRFNDAFKDRFKKSPRE
IRRVPILDDEGLSITIPYRPPFDFSGLMQSYQSHRIGQLEWFTDGQMHRVIEFNGKVGQI
SIRNDEKKSHLVVKIQFPDTSVMHTLISRVRNLFDLDSDPALIANALESDSQVKKLLKTC
PGIRMPSGWSPFEVAIATILGQLVSLEQARSLVSQLIEIAGQETQYQINGQRIKLFPTPQ
QIVKADLSKLKTTGLRKQTLVDFSKAILSGEISLEPTQDVEEFKKKVMTIKGIGLWTAQY
MSMKVLRDTDSFPASDLILKRALEIHSSEVIAAMAPWRGYVAALFWRVYAQELKKTKKVK
GSST
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaaatctgacatttattacagcgctatgatagcacgggacccgcgctttgat
ggcaagttcttcataggggtaaaaacgacaggcatctattgtcgtccgatttgtcccgcc
aaacctaaaaaagaaaatattgaatacttccacagtcatatcgaagctgaaaaagcaggg
tatcgtccttgtctgcgctgccgccctgaaagtgcgccgctgtctccggcatgggttgga
aaatcggcggtggtccagcgagctgtgaaggttttaaattcgcaggatacaatcgagttc
agtgaagatcagtttgccgttcagtttggtgtcagtgcacgacatttgcgtcgacttttt
atagaggaaatcggcaaaacacctaagcaattatcttttgaaaatagactgaatttagca
cgcaagctgataacggaaaccgtgttgccgatgtcggaagtggcttatgccgcaggattt
tcttccgttcggcgttttaatgatgcctttaaagatcgttttaaaaagtctccgcgggaa
attcgcagagtacctattttagatgacgagggactcagcatcacaattccctatcgtcct
ccctttgatttttctgggcttatgcaatcctatcaaagccatcgcattggtcagttggaa
tggttcaccgatggacaaatgcatcgggtgatagaatttaatggtaaggtcggacagatc
agtattagaaatgatgaaaagaagtcccacttagtagtgaaaattcagtttccagatacg
tctgtaatgcacactctgatttcacgggtacgaaacctttttgatttagattccgatcct
gctttgatagctaatgctttagagtccgatagccaagtcaagaaactcttaaaaacctgt
ccgggaattcggatgccgtcggggtggagtcctttcgaggtggccatagccacgatactg
ggacagttggtaagcttagaacaagcgcgctctttagtgagtcagttgattgaaattgcg
ggacaagaaactcaatatcaaataaatggtcagcggataaaactttttccgacaccacag
caaatagttaaagcagatttgtccaaattgaaaactacgggacttcgtaagcagacactg
gttgatttttctaaggcgatattatctggcgaaatttctttagaaccaactcaagatgtt
gaagagttcaaaaagaaagtgatgacgattaaagggatcggtctgtggacggctcagtat
atgtccatgaaggttttgcgtgatacggattcatttccagccagtgatttgattttaaaa
agagcccttgaaattcattcctctgaggtcatcgcggcgatggcgccatggcgaggctat
gtggccgctctgttctggcgtgtgtatgcacaagagttaaagaaaacaaaaaaagtaaaa
ggaagttcaacatga
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